G63890


Basic Information

Item Value
gene id G63890
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 23850350 ~ 23897755 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79937
aaaaaaaaaagaaaaaaaaaacattttaaacattaaatataagaattaaaaatacagtacataataATGACAACCTGTGTACGAATGGGTAGAGATTGGATTCTTTTCCATTTGTGAAATGCAGATTTCCCATTCACACAGGGATTGAGCCATGTTTCTGGAGAGGACAATGAAAGCAAAACCCATTCAATCCTATGTTAAAGAGTTAGGCatgaaatactttttcacaCTGAGGGTGGAAGTAATGTAGGCAGAATGTCACATGCTCTACagtttgtaatatttttcaattagtagaatgaagaaaacattatggaaaatgtaattaatatgaattatgaattactGTCAAGTTTTTGGTATTAATCATGTTTATATACCCCAAATTACACTAGTTGCTCTTGAAGTAGGGAGATGGTCGAGACAGGGTGCCTCATGTATTGTTGCACCACAgcaatgatgattattatattcaCGACAATTATATATTAAGGAATATTGTGTGCAATTTAATAATGGGCAGCATAAGATCTTCCAACAACAACATTACTTACTAGTCTttctaatattttgtttattcacaaACTATTTCTCCACCATAGTCAACCAATTGATCTTTCTCCAGTCATGAGCCAAGGTTATGCCCCTGACATAGGTGCCTTGGCAAATGTAGTCAAGGTCAGTAGCgtttaacagaacaaaaatgttcaAAGAAACCTCCAGCATTCGCACTGCCTACTTCTACAATCCTACAATCTACAATGTaaactgtgttaaaaaaagacaCTCCAGTAAAAGAAGTTGCCTCATTATAAAAAGACAGAGGGATCAAGATTTACTGAGCATTtgctcaaatgtttttgtttttttttattaataattttgtcaCATACACATAACTTCATATTACAGGTTTAGATGCATTTGTAGGTTCTCAGATTACAATATTCTGATTCCCTTACTTTACATTGAAAGCTACTGctataaaacattgcattttagcAAAGGCTTAGTAAATCTGTCCCAGAAAGTTCTATAACCCCTTTCAAATACACAGCTGAACCAGTATAAAAAGAAGACATCCAGAATAGATCCAGAATAGACAGAACACGTCACCTATACAGACCACTTTACTGCAATGACTCAGTAGTTGGTATAAGTAATTACAGAGTACCTAAAGCAATCGCAACACCAATGAGATGAGGAATGGGAGAAAGGGGGGGATGCTTCAAGGCAACAAAAGAGACATCTGGACAAGACTCATCTTGCCCCAATCtcctccccacctctctctcgGGGTTGAACGTGGAGGCAGTGGAGAAGTCCCCAGAGAGAAGACTGGGGGCAATATGAGTGCTGAGGAATCTTCTCTTGCTCATTCCTGGCTGTAAATGATGTGCAGGGTGTTCAGTCTGATATATCAAGGCCTCAAGATAAGATGGGATGGATGTGGAGCAGTAGAAGGAGCTCAGGATGATCGATTTTCCAGCACGTAGAAGCGATACATCAAACCCACAATAGCAGCAGCAATGGCAGGAATCAACCAGGTTGTGATTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79937 True 1560 lncRNA 0.37 3 23850350 23897755

Neighbor

gene id symbol gene type direction distance location
AMCG00020517 zfhx3 coding upstream 168048 23657711 ~ 23682302 (+)
AMCG00020519 zfhx3,LOC105888974,LOC106533552 coding upstream 239204 23608590 ~ 23611146 (+)
AMCG00020518 zfhx3 coding upstream 267610 23575106 ~ 23582740 (+)
AMCG00020515 NA coding upstream 618042 23214389 ~ 23232308 (+)
AMCG00020513 usp10 coding upstream 645058 23171800 ~ 23205292 (+)
AMCG00020522 NA coding downstream 27425 23925180 ~ 23971574 (+)
AMCG00020528 NA coding downstream 159339 24057094 ~ 24062675 (+)
AMCG00020530 psmd7,LOC107584693,LOC107659147,LOC107553010 coding downstream 262522 24160277 ~ 24163714 (+)
AMCG00020535 NA coding downstream 304559 24202314 ~ 24210374 (+)
AMCG00020536 NA coding downstream 318316 24216071 ~ 24225069 (+)
G63789 NA non-coding upstream 763417 23086378 ~ 23086933 (+)
G63787 NA non-coding upstream 773037 23076901 ~ 23077313 (+)
G63784 NA non-coding upstream 780201 23068311 ~ 23070149 (+)
G63772 NA non-coding upstream 876259 22973878 ~ 22974091 (+)
G63592 NA non-coding upstream 1459109 22383517 ~ 22391241 (+)
G63898 LOC108433019,LOC103398424 non-coding downstream 752 23898507 ~ 23899754 (+)
G63947 NA non-coding downstream 172961 24070716 ~ 24072160 (+)
G63948 kars,LOC107738348,LOC107584690,LOC107679917 non-coding downstream 177294 24075049 ~ 24076475 (+)
G63951 NA non-coding downstream 190759 24088514 ~ 24093237 (+)
G64009 NA non-coding downstream 334984 24232739 ~ 24242677 (+)
G63786 znf821,LOC107747380 other upstream 775405 23070411 ~ 23074945 (+)
AMCG00020505 NA other upstream 788201 23053798 ~ 23062149 (+)
AMCG00020487 NA other upstream 1440857 22356174 ~ 22409493 (+)
AMCG00020470 NA other upstream 1708152 22135368 ~ 22142198 (+)
AMCG00020438 NA other upstream 4214129 19631325 ~ 19636221 (+)
AMCG00020529 LOC107090538 other downstream 135282 24033037 ~ 24068457 (+)
G63939 NA other downstream 154234 24051989 ~ 24055592 (+)
G64046 NA other downstream 581080 24478835 ~ 24482114 (+)
AMCG00020572 NA other downstream 1164618 25062373 ~ 25076690 (+)
AMCG00020573 NA other downstream 1180387 25078142 ~ 25084873 (+)

Expression


Co-expression Network