G64412


Basic Information

Item Value
gene id G64412
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 25640570 ~ 25643373 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU80578
CTACCTGCACAAAAGCCCACTGCACATGTAATCCAGAGAAGGTAACCAGAGtgaaatttattttcatgttgtgtTCGTATTCATCTCTTACATGATTTCCTCTTGACCACATAGTAGGTGAACTTAGAAACTCTGTAGagcatatattacattttagagATTTCCTTGTgctttgtgattattattgctttatttctgATGTAATATCAGTACattgatgaaaacaaaccatgtaAAATTGTATTACCTCTcagttttccatgtttttttttttttaagcctatCTTTTGAATAGTCTTACAAAACACAGTTAAGCCAGAGCCTCGGGGCTTCACTTCTGCATCCACTTTAACAGAAGGCAATGTACACAGACCAGATCAGAtttgcagtgctgtgctgtgtcatACAATTCCTTGTGATAAACCAGTGTAGGTATTTAGAAAAACTTTCCAATTTGAGCTCTAGCACAAAAGCAAATCAGTAGAGGACatgggatttaaaaacaaacttggaAACTGAGagcctttattttgtttgttttgtgttttggggtTGCCATAGGAGCTTTGAACTCAGCCCCAGTCCCATTATCTTTGTCCAGGTTGCATAGTTGAATATGCCTCAAACTCTTTGCTCAGACGGCTCTTGAGAAACCAGCAGGAAATCTCAAGTGTCATCTCCTGAGAGCCAGTAGCACAAAATTACAACCACGTCGCCACCAACTACAACAACACAGGCCCCCAGCAAAGATGAGCTGCACAGTGCTACAACCGGGTTTCCAATGAGAAGCAGATTAACCTAAAATGCAGGGCTATTATAGATGAACCACTGTTGGTCCCTAGAATACCGATCATTCCTGGCCCATGTGGAAATCCTTCGGTAACAGTGTTCTGCTGTACAGTTGTTCCATAATTGTCAACCCCCCCTCTTAAAAATTCAAAAAGCAACAACCTCAGTCCcacattttacatgaatatgATTTTGACTCATCTGAGGTGATTGATCACAAGCAGGACAATGTTTTGACATCTGCTTTCAGAACGTCCTTCTGAAAAACAAGAATTGTCTAATTTATTATTCTGTAGTCTGTTATAAAAACTGCTGTGGTTTCTCAgggtttgtttttgaaatctgGGAGATGAATGTATTGATGTTACTGTTCAGGATGTTGCTTTAACAATGTGCACTGCTTATTCGTAACACTGCAATCCACAGAGATGTACAATACTCATTctgtttcaattattttcagtgtacttttgatgtttttgttgacaatttgtgtgtgtatgcatagaTATTTAATGCTTCCTCACTTGTTATAGCATGTCAATTCtgaagcatatttaaaaaaaagtccataTATACTGCACATCAGTACCCACCCACATTTGCACACTATCTCACAGAAGACCTTTTCAGGTTCATTGTTcatttatgaaaaatgttgaCTTCTTCAGGTAACATGGCATATTAAAATGACAGACATGTCAAATGTTCTCTCCGTAACTGTCTCAGCATTTGCCCGAGGAATCACTTGGCAAGGAACCCACAAAGATCTGAAATAAGCAAAACCTGGATGGCAATTACCTCATTTATACCAAGATCATTCATCAcagagattattttttgttgtaaatcCATGTAACTTTCCTGGCACAGGGGGTTGTTGGCTGTGGATTTTGTTACGCATTTGTAAATGTAAGCATTACAAACACTGGCATTGATACTTTTCCATGTAGAcaatagtgttgttttttaattatttctattaattccagttcatatttacaaaatgtagacATCTAACTTGATTCaagtatataatttttaaacagTGCTTGCTTCTTCCAAAAATGGTAAGTGCACTACTGAATGTATGTAGTTTAGATCtgcaaattgttatttattttttcaagcaGAATTCTTGACTGAATTGTAGTATCATGTGAAATGACTGCACGCCGGGCGTGAGAGAAGATCTCCGTTGTATATTTGGTTTGGCTCCTCTCTCCTACTGAGGTGAAGTGACATACCTGAACAACCATGGGAAGGATAAATCCACTGGAATCCCTGTGaataccattttatttattttattgaatttcaaTGATGAGCCAATAACGCTCTCTGCCTTGGGGCGATTCAATCTTAAAAGATCGGAGTGCATCAGCAAGCAGTTGTATAATGGAAAGATGTAGAGAACTTGCATAGCAACCTCTTTACTACTCAGATATAATATTAGACTAATTTATATATAAGTGTATTGATGAGGAGATATATtttttggctttttattttttatttggttttgtttgtccaTTTTATGAATTAGAGGGTAAAAAGGGTAGTTTGCATGAAAAACAGGGAGGCGGGGGGTGATGTATATGATTTCCTTCCATAAAAACAAGTTTGCATCATAATTTAATCAGCGTAGAGGAACTTGCAGTTTAATAGAAGTGGAGTGTCACTCAGCAGCTCCATGTATATTTACATCTTTACATCAAGATTCCCTGAGTGTAGAGCGGGAGGGAAGGTTCTTGGTGAAGCCGAATCCTGTGGTCTGAGCTCTTCAATTGCTCAATCTGTATGCAAAGATATGCAACATGTTTTCCTGCTGAAGTGTATTAAACTCATTTGTACTGGAACTAACATTAAGTTAGCCTGAATTTTGAATGTCAAATGTACACTACAAATGCATAGCTGCAagtttctgtaaataaaatgtttatctttTTATGCCAGTGTGCTGCTTTATAGAGTACTGTACGATGTAagcaagatgtttttatttataataaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80578 True 2804 lncRNA 0.37 1 25640570 25643373

Neighbor

gene id symbol gene type direction distance location
AMCG00020601 NA coding downstream 45302 25590014 ~ 25595268 (-)
AMCG00020595 chmp1a,LOC106573671 coding downstream 65960 25565583 ~ 25574610 (-)
AMCG00020597 NA coding downstream 87601 25551590 ~ 25552969 (-)
AMCG00020594 gabarapl2,LOC107560072 coding downstream 160808 25473255 ~ 25479762 (-)
AMCG00020591 LOC102778684,LOC107573013 coding downstream 292252 25331073 ~ 25348318 (-)
AMCG00020602 NA coding upstream 374 25643747 ~ 25681156 (-)
AMCG00020605 NA coding upstream 85606 25728979 ~ 25737475 (-)
AMCG00020612 NA coding upstream 218382 25861755 ~ 25867205 (-)
AMCG00020615 NA coding upstream 267189 25910562 ~ 25917773 (-)
AMCG00020620 NA coding upstream 317005 25960378 ~ 25965307 (-)
G64342 NA non-coding downstream 175220 25464877 ~ 25465350 (-)
G64341 NA non-coding downstream 176454 25463540 ~ 25464116 (-)
G64340 NA non-coding downstream 178928 25461427 ~ 25461642 (-)
G64274 NA non-coding downstream 376335 25261926 ~ 25264235 (-)
G64258 NA non-coding downstream 423877 25203124 ~ 25216693 (-)
G64418 NA non-coding upstream 48035 25691408 ~ 25779211 (-)
G64477 NA non-coding upstream 288326 25931699 ~ 25932142 (-)
G64510 NA non-coding upstream 342075 25985448 ~ 25989689 (-)
G64562 NA non-coding upstream 548188 26191561 ~ 26192678 (-)
G64608 NA non-coding upstream 783777 26427150 ~ 26428274 (-)
G64298 NA other downstream 310000 25330084 ~ 25330570 (-)
AMCG00020590 LOC108250636 other downstream 337589 25289502 ~ 25302981 (-)
AMCG00020589 NA other downstream 356361 25272593 ~ 25284209 (-)
G64271 NA other downstream 398059 25242169 ~ 25242511 (-)
G64260 NA other downstream 429507 25209059 ~ 25211063 (-)
AMCG00020604 NA other upstream 43902 25687275 ~ 25715457 (-)
AMCG00020614 NA other upstream 242677 25886050 ~ 25905598 (-)
G64470 NA other upstream 255055 25898428 ~ 25918630 (-)
AMCG00020613 NA other upstream 291528 25934901 ~ 25948343 (-)
AMCG00020639 LOC107583916 other upstream 1602641 27246014 ~ 27249676 (-)

Expression


Co-expression Network