G64418


Basic Information

Item Value
gene id G64418
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 25691408 ~ 25779211 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU80594
AGATTTTGTGGTgaacttgaaattaaaaaaagaaacgaagaattatacaaaaatcaaatttatttatttaaaagcatatgCATGTTTATGGGAAGTGTTTTTCTAAATGGTGTGGTACATTAATGTGTATCACAGTGAAAATGTGAGAAAAAGTGGGgcatattgtatattatatgaaCTGTTCTTCCCTAAGGTAAATAAAATCACTGTCAAACCAAGCATTTTTATTGCAGCGTAGATTTATTGAATGTTTACAAGGTcctttcagagagagagagagaggaaaaaaaaggtctTGGCACCATCATATTTCTGAAGCCAGCCAAGCAGactctgacacactgaaaaAGCCTGGTGCACTTTCCCAAAAGCACGGCGATCTCTAGCCCTTGCAGTGGAAAAGAGCCACACACAACACCTGACCACAGACTCGGAAAGCCACATCCACCCGCGGAAAGGAACAGTGATccaaaattatgaataaattagAACAGCCAAGGTTGCAAAATAAAGGCTGACATTAAAACAGAGTCAGCCAGTTAAATACCTATTCTTACATTCTGTAATCCACAATCTCAGTTGAGATCGATTGTTTGGTTTTTGGTACATTGTGTTCTGACCAAAATAAGAGCAGATATAAGATTCATTTTCCTCACATACAGAGTTAAGACACAACTGTCCTTTACTGTGGATTGAAAGAAGCACTCCGTGACAGaataaaaactaagaaaaacaaataagccaAAGAGCATCTGGATATTTTGTTTCTggttcacatttgttttgcagaatttAATCACAGCAAAGCAGCCATTAGTATTGTCTGGAACCCTAGCAGTGCAGCAATATTTGGCTTTCTGTAAAGCGTCGAGGGAATAGTGCTGCCCTGCCAGCATTGTTgagtctgtttgtttcttttgttgtggTATTTCTTAGTAAATATCCTTTTCCTCTGAAGCAGGTGGGGGTGAGTCGCTGAGAGTGTCTAAATTAACTCCCAGACTGGGCGGGAGACTAGCATCTGTGAGTAAACAATGTAGAACTTGGATGATACATCCTCCAGatcaaagacagagagagagagagacagagagagaaaagcctTCAATTCACCTTTCTTTATGGCCGGTGCATTTGgtgtgcaaaataataataataaaaataataataaaatgaactgtGAGGGAAGTCCTCTTCTGCCTTTAAGGCCCAAATGGTCCAGTCATTTTCTCCCCTTCATGCCTGTGCTCTTTGTCAGTGGTGTGATGCCCACATTATTCCCACAGTATTCCCTTTGGCTCATCCTCTTGTAACGTAAGCAGCACTTATTCAGGTAAGGCAGACTCCGATACATCCCCAGCAAAGTGTTTCCCCAGAAAACCTTTAGTCTTTTTTTTNttttttttttttttttttt

Function

NR:

description
PREDICTED: tubby-related protein 3-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80594 True 1417 lncRNA 0.39 2 25691408 25779211

Neighbor

gene id symbol gene type direction distance location
AMCG00020602 NA coding downstream 10252 25643747 ~ 25681156 (-)
AMCG00020601 NA coding downstream 96140 25590014 ~ 25595268 (-)
AMCG00020595 chmp1a,LOC106573671 coding downstream 116798 25565583 ~ 25574610 (-)
AMCG00020597 NA coding downstream 138439 25551590 ~ 25552969 (-)
AMCG00020594 gabarapl2,LOC107560072 coding downstream 211646 25473255 ~ 25479762 (-)
AMCG00020612 NA coding upstream 82544 25861755 ~ 25867205 (-)
AMCG00020615 NA coding upstream 131351 25910562 ~ 25917773 (-)
AMCG00020620 NA coding upstream 181167 25960378 ~ 25965307 (-)
AMCG00020618 NA coding upstream 186929 25966140 ~ 25971800 (-)
AMCG00020619 NA coding upstream 242531 26021742 ~ 26053728 (-)
G64412 NA non-coding downstream 48035 25640570 ~ 25643373 (-)
G64342 NA non-coding downstream 226058 25464877 ~ 25465350 (-)
G64341 NA non-coding downstream 227292 25463540 ~ 25464116 (-)
G64340 NA non-coding downstream 229766 25461427 ~ 25461642 (-)
G64274 NA non-coding downstream 427173 25261926 ~ 25264235 (-)
G64477 NA non-coding upstream 152488 25931699 ~ 25932142 (-)
G64510 NA non-coding upstream 206237 25985448 ~ 25989689 (-)
G64562 NA non-coding upstream 412350 26191561 ~ 26192678 (-)
G64608 NA non-coding upstream 647939 26427150 ~ 26428274 (-)
G64625 NA non-coding upstream 792291 26571502 ~ 26571716 (-)
G64298 NA other downstream 360838 25330084 ~ 25330570 (-)
AMCG00020590 LOC108250636 other downstream 388427 25289502 ~ 25302981 (-)
AMCG00020589 NA other downstream 407199 25272593 ~ 25284209 (-)
G64271 NA other downstream 448897 25242169 ~ 25242511 (-)
G64260 NA other downstream 480345 25209059 ~ 25211063 (-)
AMCG00020614 NA other upstream 106839 25886050 ~ 25905598 (-)
G64470 NA other upstream 119217 25898428 ~ 25918630 (-)
AMCG00020613 NA other upstream 155690 25934901 ~ 25948343 (-)
AMCG00020639 LOC107583916 other upstream 1466803 27246014 ~ 27249676 (-)
AMCG00020657 NA other upstream 2382391 28161602 ~ 28239074 (-)

Expression


Co-expression Network