G64510


Basic Information

Item Value
gene id G64510
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 25985448 ~ 25989689 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU80718
CGTttttgaaaaaaaggaaatttatTCTGAAATGGTTGATCTCTTATAATGATGCTCTTCCAAAACTccacacaatacatacacaatttccacagttttttttccttttcccaatttttcaaaaaaataaacccagcCAACTCtcatagaaaaaaacaaaatattttcacacaccacaaaacctttcattttggtcaaaatgaaaaaactaaattgtgccACTGAACTTGTACTGAGTTTTTGatccacagttttgtttgtttgtttacagctACCTGTTGTGTACaccatacacacatttatatccATCTATACAGACGTATATAGATTGATATAGATAAATATTAACAAGAAAAAGAAGGCCGTTGTTTGTAATCAAGATAACTTTTTAGAAAATTAGAAAGCCAATCGATCCAATACCACTGCAAggacaaatcaaattaaatctcgCATGTCCAGAGGCCTCTCCAGGATACATTTCCACATACATCCTCCTCCTCATGGGACTGCAGACAGGAGGCTACATTTTAAGGcagataaaacataaaagggCACATTCAACATCTGCAATTAGGTGTGGGGAGGGGAAGGGCTCGTCTCTGGTTTAGAAACAGCCCCCGGAGGAGCAAATGCAAGGAAGTTATATGCCACTTTAACACTCTTCACAGACAGAGGGAACTCTCTGGACAAGCTCAGAGACCAACAGGATTGTGTCCCTTAAAGTAGAGCAGCATTCTCCAGTCAGGGATCTAACCAAAACTGATCTAATCAAAGACTGAAGAACGCTCTTCTGCATTAAGCAACGTATCACAAAGGAACTAACTATGATCAAAAGCACAATAAATTCAAaaccaatctttttttttttttttgcccatcCACCTTTTAAACTCTGGAAAGGTCTGTATTATTGACTTAAACAAAAAGGTTCAAGTTTAAGGTAGTTTCTATTGTTTTTGAGTATAACCATCGCTAAAGATTTCCAGTTCACTTTGGCACCCGTTTGTAAATGAGACAAAGAATCAATCAGGCAGGGTGATGCTTTCAAGGAGTGCAGTTTACTAGAAGTTCCAGTTTGTTCAAATTTAGAGAAAGTGGGGCCCCTTCACAAGCAGCTACGACAGCCCACTGTACTTTCCAGAGTCTGAAGATAAAGgggACTAATACCTTTTGAGGCTTTTAAGTTCACACACAAGTGCCAGTCGTGCAGACCTGAAACAGGCACTGACAAACACTCTAAATCATGGTTTATTACCGCTAAACTAAAGAGAACCTCAGATGACAGGTTCAGACTGTGCAGTCAGACAGAGCCTTGCCATATTGAAACAGCCCCTGCCAAACAAAATCACATAATAGTCCACATTGTTTTCCCCAGagcactgtctgtgtgtggctCAGATACCTTTGGCTCTGCTCTATTTGGGGCTTGGTGTTGTTTCAGGTACAGCTTACGTCAATGTCAGGGCTGTGTATTTCAATATGGTAAGGCTCCATATTAcccaagtaaaataaaaaataaaacgagACCAATTGCAGAGGGGATTGGTGGTGAGTTCAGTATACTGGATAAGAGCGATGTTGGAAAGTGGTGACAGATATACAGCAGATGTAGCCAAacaagagcaggagagagagtgaggtgGATCTTTGCACTGGTTTACATCTCACTGGGCTCTTCAGACCCCATGTCCAAGCAGCAGCGGCAGGCTGATGGTCTCCCTCTGGGTTCTTCCCTACTCCGTCTGGGCGTCATAGTTGGCACCTCCAGCTTTCTTCAGCTCATTCCTGATATAATCTTCTTCCAACTCCCTGGGGTCGCTAATCATGAATTCCTT
>TU80719
CGTttttgaaaaaaaggaaatttatTCTGAAATGGTTGATCTCTTATAATGATGCTCTTCCAAAACTccacacaatacatacacaatttccacagttttttttccttttcccaatttttcaaaaaaataaacccagcCAACTCtcatagaaaaaaacaaaatattttcacacaccacaaaacctttcattttggtcaaaatgaaaaaactaaattgtgccACTGAACTTGTACTGAGTTTTTGatccacagttttgtttgtttgtttacagctACCTGTTGTGTACaccatacacacatttatatccATCTATACAGACGTATATAGATTGATATAGATAAATATTAACAAGAAAAAGAAGGCCGTTGTTTGTAATCAAGATAACTTTTTAGAAAATTAGAAAGCCAATCGATCCAATACCACTGCAAggacaaatcaaattaaatctcgCATGTCCAGAGGCCTCTCCAGGATACATTTCCACATACATCCTCCTCCTCATGGGACTGCAGACAGGAGGCTACATTTTAAGGcagataaaacataaaagggCACATTCAACATCTGCAATTAGGTGTGGGGAGGGGAAGGGCTCGTCTCTGGTTTAGAAACAGCCCCCGGAGGAGCAAATGCAAGGAAGTTATATGCCACTTTAACACTCTTCACAGACAGAGGGAACTCTCTGGACAAGCTCAGAGACCAACAGGATTGTGTCCCTTAAAGTAGAGCAGCATTCTCCAGTCAGGGATCTAACCAAAACTGATCTAATCAAAGACTGAAGAACGCTCTTCTGCATTAAGCAACGTATCACAAAGGAACTAACTATGATCAAAAGCACAATAAATTCAAaaccaatcttttttttttttttttttttttttttttttttttaaatgtgttcataaaTCAACTGCTGCCTAGGTATATATAatgagtttatttattgatttatttattatggcCTATTTCTTATCCCGTCCCATTCTTTGTGGTTGTTGTCCTACTAGCACAGGAAATACCTTGAGGTATTCATACTCATAAACCAATCTTCTCCAGATACTACAGGCTGTGACTCATAAATCTATGGTTCAGTCAGATTGCAAATATTCTAAACAGtctttatttagttatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80718 True 1835 lncRNA 0.41 2 25987818 25989689
TU80719 False 1132 lncRNA 0.35 2 25985448 25989689

Neighbor

gene id symbol gene type direction distance location
AMCG00020618 NA coding downstream 13648 25966140 ~ 25971800 (-)
AMCG00020620 NA coding downstream 20141 25960378 ~ 25965307 (-)
AMCG00020615 NA coding downstream 67675 25910562 ~ 25917773 (-)
AMCG00020612 NA coding downstream 118243 25861755 ~ 25867205 (-)
AMCG00020605 NA coding downstream 247973 25728979 ~ 25737475 (-)
AMCG00020619 NA coding upstream 32053 26021742 ~ 26053728 (-)
AMCG00020622 cmip coding upstream 119330 26109019 ~ 26129019 (-)
AMCG00020623 cmip,LOC106573687,LOC106560887 coding upstream 189260 26178949 ~ 26179335 (-)
AMCG00020625 NA coding upstream 210182 26199871 ~ 26216813 (-)
AMCG00020628 NA coding upstream 383097 26372786 ~ 26393051 (-)
G64477 NA non-coding downstream 53306 25931699 ~ 25932142 (-)
G64418 NA non-coding downstream 206237 25691408 ~ 25779211 (-)
G64412 NA non-coding downstream 342075 25640570 ~ 25643373 (-)
G64342 NA non-coding downstream 520098 25464877 ~ 25465350 (-)
G64341 NA non-coding downstream 521332 25463540 ~ 25464116 (-)
G64562 NA non-coding upstream 201872 26191561 ~ 26192678 (-)
G64608 NA non-coding upstream 437461 26427150 ~ 26428274 (-)
G64625 NA non-coding upstream 581813 26571502 ~ 26571716 (-)
G64627 NA non-coding upstream 645899 26635588 ~ 26635788 (-)
G64629 NA non-coding upstream 740166 26729855 ~ 26730111 (-)
AMCG00020613 NA other downstream 37105 25934901 ~ 25948343 (-)
G64470 NA other downstream 66818 25898428 ~ 25918630 (-)
AMCG00020614 NA other downstream 79850 25886050 ~ 25905598 (-)
AMCG00020604 NA other downstream 269991 25687275 ~ 25715457 (-)
G64298 NA other downstream 654878 25330084 ~ 25330570 (-)
AMCG00020639 LOC107583916 other upstream 1256325 27246014 ~ 27249676 (-)
AMCG00020657 NA other upstream 2171913 28161602 ~ 28239074 (-)
G64811 NA other upstream 2236846 28226535 ~ 28229647 (-)
AMCG00020661 ss18l2 other upstream 2335348 28325037 ~ 28328312 (-)
G64882 NA other upstream 2798891 28788580 ~ 28796956 (-)

Expression


Co-expression Network