G64882


Basic Information

Item Value
gene id G64882
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 28788580 ~ 28796956 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81155
TTACTGATTGCAGGATATGAAAAGTTTATTGatgaatattacaaaatatttgtttttaactgtgaATATGGGATTATGTATAGAATTAAGCATTAACTATTCCAATACATGTTCTGCATAATGATTAACGTAGAAAAATGATCATGATATTTGAAGTAATACTGAATTTGGTATGGCAACCATCTTTAGACATTTCATTCTGATTTGGTGTCAGCTGTCAAAATGTTAATGATTGATACAAATTCAAATCTCCACCCCTCACAATAGCTGATTGAGTTGAACAGTTCAAATAGAAAGCGTATCATATAATGACATTCTCCTGATAGTGAATAGTAATAGTGATTAAACAagatgagagaaaaaataatcagaGAAAAAATGTGTCAGGTTTCCCGCTTGGTGCCACTCTGCTAAAAACTGACCACATTAACTGAACTGAGTAATTAACTCATAATCATTCAACTGACCACTACTCTGCAATGTCATAGCCTAGTCATTTCAAATCATGCGATTGTTCTCCGATTGTCATGACTGTGATTTGATCTCAGTCGCTTCAGCTATTAGcctttattagtttatttattgtgaggCAAGGtgtgtaatttgatttaaaggAGAGAATCATTCAGAGCTTCTGGCTGGCCTAGTGGTCGAAGGCCTTGGAGTCACAGCCCTCGGCCATGAATGCCTCGATCTCCTCCACCGTCCGCGGTACGCAGGTCAGCAGCTCCATCCCGCTGGCCGTCACCACGATGTCATCCTCAATGCACCCCTCCTATAGAGCGGAAACTGGGCAGCACGTCGTTGTTGATGAAGCAGCTCTGGCTGGGCGTGGCCAGGGCCTGGTCCAGAAGATGGTCAATGAAGTAGATGCCGGGCTCCACTGTCAGCACCATACGCTCCTGCAGCACGCGGGCTGTCCTCAGGCTCTTCAGACCGGGTTCGTCGATCCGCTCCACCCCCTGGAAACACCCAGAGACAGGGGCAGCCATCACATACTGTACACTGACCTACTGGAGGACTCGGAGAACCAGGGGTGACAGCTGCGTTCACATGATGAGCTTAGCTATCTCTTACCTGGTTACTAGGGATAATATACTTTTGCCAAGCCTGTTTAAAGTTCTGACATTTGACAAAGTTAAGACTGTTCTGGGAGAAGCAGTAGGGCACAAACGCACTTACGCATTACCTGTTCAGGTCCTAGACAGTTCACTTCAGTTTCTGGTGCTacagggtaaaaaaaaaatgcactgcaTATTCAagggaaataaaagaaaagccaTTCAGTGAGGCATATCTGTGACCTGAGAACACAGTTACCATTAAAACTGTCAATGGAAACCTCCAGCAGAAATACCTGCAGTCAAACTTCCCACTCTCCGAGGCAGAACAGGACGTCAGATCCAAACAACCATATATACTATTGTTGCTTGTTGTGATCAAAACCTCTAATTCCTGATCAAGTTAAGATGATTTGAAGCACCTGCATGTCATTTGGGTTCAGAAATATGTACAATACCAAAATTAGGGAAAACACTGCATGGAAAACCAAAAGCAGTCTTTTAAAGCTACATCTAACATTTGAACCGACAACATAAATAGGGAAGAGaacaatgcacttttttttaaagaggctTTTTGTAACCATGATGCCAAGATAAGTTAACTTAAAGTAAACCTCCTCGAAGACTCTGGCACGCAAAATAAAGAGGGAACATCTGGAAAACATGTCTTCGGATATTTCTTTGGTTGCGCTCCTTTTCAAACTGAAGGCCCCTAATGGTTTTTATAATTTAGCATAAAGCTAGGGATATTTGTTTCAATAATCTTTCATTCATGCAGCCACACTCATAAAGCACACACTCATAAAGCACAGTTGTGCACTGCTGTCAGTAGTGACAGAGTATCTCTATCTCAGAAGCCAAGAACATTGAGTTTCATTAAGCAGTTCAGATAAGGCAACACACAGAGGTATATTTTGGAAGCTGCAATGAGTGACTGGAGAATTATCTTGCTTTCCAAAACATACTGTCAAAAAATTAATAAAGCctacaaagaaagagaaaaggtaCATAAATGGTcactaaaaatattaattgaaagaTAAAGGACAAGCAGTTGATAGAACCACtaatctccaaatcccacacatgGGCACAATAAAGGTTAGAAACGAGAGGTAATCGGCCCATCttactcatttatattttaagtaggtACTTGATGCCAgaatttaaatcagtatttcctGAAGGAACCTAGAGGGTCAGCATCAGCTATAAACCTGGGTATTTGGTTCCAGTGCGTTTTGGTACAATAATGCCTGCTATTTCACGTTTAAATGGTAACCTTAACTGTGAACTTGTTTAATTTTTAGCTAGTAGTAATCCAAGGGGTTCATTTTTATCCATCCCATCTGTTGAGGACTATATGgtttcacttgctttagcctgtCTATGTATgacttttatttcagaattgGGATTACTCTAGTGGCTCTGCTTTGAACTTTTAATGGCCAATGTCCTTTTGGGAATCACGGAGACCCATTTTCTACACAGTTTTCTAAATTGCACTATGCACTTGCATGATTTGGAGAGATCTGCCGCCAAAGTTAGTGGTTTCTCCAGTGGTTCTGAATATTTGAGGAATGTCAGTAAGGAAAGGGTCAGGACTGttaaaaacaatagcaaagTGAGAATATGGGTTGGTCTCAGCGAGGAAAATCTGTAGATCACATGTGGAGAAACTTCCTTCCTTTTCACTCTTCACACAACTCCTCAGTCTGATCCTCCCGGCTGTTTGACGTGCACCCTCAACATCAGAGCTTAAGATATTAGACTCCAAACATCGCATCCCCTCAGGCAAGAGCAAGACTCCTATGGACGAGAGGCAGCGCACGTGCTCCTTAAAACACCAGCCTTTCTCCGGAGTCATCCGGTGCTTTCTTGGCTGTGGCTGCCAACAATGTGAAATTTGTGCAGACGCAAGCACGGGCTATCGCAGACCAGAGATAAATGGACAAGATCGGAGAAAGGGAGTAAACCCCCGGCCCAACGGCGCAGAATAAATCTCGCTGAAATCCCACACCAGAGGCTGGTAATTCTCACTCGGCCGGGAGCCTGGAAGCAACCAGATAATATGTCTGGACGATGTAGGCCCGtccaatgaaaaacacaatggaaatgaaaTCTCACATCTGTTaagattcctttttcttttttctcatttatttttcagatagtCTTATTCCCACGAACTGGAAATAGAGCTTTCTACATTATTTACTGCTTACAGGACTCCTTCACTTGCATGGTACAGCGCTAAAAAGTATGGGAGGTTCTAGTGTGCTGATACTACTTAAAGACATATGTAGGTGATATCTGCACTGTTTTtcaataaactttttttttttttttttttttactctcacAAAAGGCTTATTTTCTTCTTATCCCTAGCTTGCTTTTTATTGACTGTATGCTGTCTTTTCGGTACAAGTTAATTACACCCACGTCCAACAACCGTTAGTtgcaaataaatcacagaagTAGATACATGGTGTGGGGCCaatttccaaatattttaattcacagTATTCTGGCCAGTGAGCAACAGCTAATCAAACTACAAACAAAGCCTGGAAGCAATTTATTTCGAACACTGCGTACCTGGCAATTGATATGCTTACTTCTAACCCCCAGAAAAGTGCAGCGTATGTAAAAATCAGCGAACGCATACAACAATTCTTAATttctatcaaaataaaaacacactggagGCCTAGACTGGTTCTTGAAGTTGCAAAAAAATCTGATTACTTTCTCCAGGAATAAGAACTTTGTTggttggaaaacaaaactgaaacaaaagggggaaaatgtatttgttttgggtGATATAGTTGCTCTCTTTTAGCatcttatttgaaaaacaaaaactgtgaaCTCCAAAATATATGGTATAGTtgaatacaacatttaaaagaaaaaaacagggatACCTGAACcggggagaaaaacacaaaaacaaaatcttgaaAGCAGAAATTGTATtgtgtactgattgtattttgctgtactttgtaatgctatgaaaatgtttcttgtgaaaacatCACTCTGGGTAACAGCATCTGCTAagagacaaataataataattataataatcgcAGCAGCCCTGAGACTGTATCTCAGAGGGGTAGTGTTTTCATGTTGTGAACCTGCTTGCCCTCCCCTATTCAGCTCAAGATGCTGAAAACTAAGCCAGCCTATATGCTCTTATGCCCATTTCCTGGCCACAGGCCATGATGGAGACTGACCTCTGGGTAACCCCCCACATCATGCACATCAATGCCCAGCAGGTGCCCCAGGCCGTGGGGCATGAAGATTGAACCCATGTGAGCCTTCAGCATGTCTTCCACACTGCCTTTCAGGATGCCAATCTTCACCAGCTCCTCCAGGTGGACACGGTCAGCCAGGCGGTGCATATCAGGCCAAGCcacccctgagagagagacagagagacggggTGAGGGGTGAACACAGACACATTAACACTAGTGCAGTAAGAGAGAGCTGGG

Function

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG:

id description
ko04950 Maturity onset diabetes of the young

RNA

RNA id representative length rna type GC content exon number start site end site
TU81155 True 4582 TUCP 0.41 2 28788580 28796956

Neighbor

gene id symbol gene type direction distance location
AMCG00020666 NA coding downstream 300709 28481482 ~ 28487871 (-)
AMCG00020664 kctd15,LOC107668486 coding downstream 338219 28431779 ~ 28450361 (-)
AMCG00020662 NA coding downstream 446403 28328985 ~ 28342177 (-)
AMCG00020659 gpib,LOC108428767,LOC100196524,LOC103130839 coding downstream 523389 28250873 ~ 28265191 (-)
AMCG00020658 NA coding downstream 640733 28137230 ~ 28147847 (-)
AMCG00020669 cebpg coding upstream 7245 28804201 ~ 28804674 (-)
AMCG00020672 NA coding upstream 204815 29001771 ~ 29013295 (-)
AMCG00020677 NA coding upstream 262459 29059415 ~ 29071096 (-)
AMCG00020676 LOC107834818,LOC108165933 coding upstream 275350 29072306 ~ 29096123 (-)
AMCG00020675 NA coding upstream 338373 29135329 ~ 29140819 (-)
G64847 NA non-coding downstream 465416 28316769 ~ 28323164 (-)
G64745 NA non-coding downstream 1367934 27420366 ~ 27420646 (-)
G64708 NA non-coding downstream 1552258 27236083 ~ 27236322 (-)
G64632 NA non-coding downstream 2042757 26745549 ~ 26745823 (-)
G64630 NA non-coding downstream 2056292 26731435 ~ 26732288 (-)
G64886 NA non-coding upstream 61033 28857989 ~ 28858354 (-)
G64912 NA non-coding upstream 199436 28996392 ~ 29001633 (-)
G64991 LOC103376870 non-coding upstream 462601 29259557 ~ 29314059 (-)
G65023 NA non-coding upstream 1088645 29885601 ~ 29885899 (-)
G65033 NA non-coding upstream 1186157 29983113 ~ 29983365 (-)
AMCG00020661 ss18l2 other downstream 460268 28325037 ~ 28328312 (-)
AMCG00020657 NA other downstream 549506 28161602 ~ 28239074 (-)
G64811 NA other downstream 558933 28226535 ~ 28229647 (-)
AMCG00020639 LOC107583916 other downstream 1538904 27246014 ~ 27249676 (-)
AMCG00020613 NA other downstream 2840237 25934901 ~ 25948343 (-)
G65000 NA other upstream 584359 29381315 ~ 29405636 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other upstream 723235 29520191 ~ 29533117 (-)
AMCG00020694 wwox other upstream 1652789 30449745 ~ 30531136 (-)
AMCG00020700 NA other upstream 1925827 30722783 ~ 30737976 (-)
AMCG00020702 NA other upstream 2003626 30800582 ~ 30808846 (-)

Expression


Co-expression Network