Gene
RNA
| Item | Value |
|---|---|
| gene id | G65033 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 29983113 ~ 29983365 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030123 | AP-3 adaptor complex | cellular_component |
| id | description |
|---|---|
| ko04141 | Protein processing in endoplasmic reticulum |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU81342 | True | 253 | lncRNA | 0.32 | 1 | 29983113 | 29983365 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020686 | NA | coding | downstream | 478701 | 29487288 ~ 29504412 (-) |
| AMCG00020680 | NA | coding | downstream | 515092 | 29464875 ~ 29468021 (-) |
| AMCG00020682 | NA | coding | downstream | 525462 | 29418816 ~ 29457651 (-) |
| AMCG00020681 | NA | coding | downstream | 614717 | 29336704 ~ 29368396 (-) |
| AMCG00020678 | zgc:165481,LOC107657136,LOC107696720,LOC107554618,LOC107551474,LOC108432404 | coding | downstream | 761711 | 29220680 ~ 29221402 (-) |
| AMCG00020692 | NA | coding | upstream | 144854 | 30128219 ~ 30145527 (-) |
| AMCG00020693 | NA | coding | upstream | 381655 | 30365020 ~ 30420634 (-) |
| AMCG00020699 | NA | coding | upstream | 774761 | 30758126 ~ 30760083 (-) |
| AMCG00020706 | NA | coding | upstream | 1156328 | 31139693 ~ 31143403 (-) |
| AMCG00020705 | NA | coding | upstream | 1162722 | 31146087 ~ 31151972 (-) |
| G65023 | NA | non-coding | downstream | 97214 | 29885601 ~ 29885899 (-) |
| G64991 | LOC103376870 | non-coding | downstream | 669054 | 29259557 ~ 29314059 (-) |
| G64912 | NA | non-coding | downstream | 981480 | 28996392 ~ 29001633 (-) |
| G64886 | NA | non-coding | downstream | 1124759 | 28857989 ~ 28858354 (-) |
| G64847 | NA | non-coding | downstream | 1659949 | 28316769 ~ 28323164 (-) |
| G65035 | wwox,LOC107555694,LOC107742620,LOC107669551 | non-coding | upstream | 143324 | 30126689 ~ 30390868 (-) |
| G65050 | NA | non-coding | upstream | 551927 | 30535292 ~ 30535896 (-) |
| G65061 | NA | non-coding | upstream | 633515 | 30616880 ~ 30617134 (-) |
| G65068 | cdyl2,LOC106562298 | non-coding | upstream | 689380 | 30672745 ~ 30672962 (-) |
| G65071 | NA | non-coding | upstream | 709783 | 30693148 ~ 30693367 (-) |
| AMCG00020685 | bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 | other | downstream | 449996 | 29520191 ~ 29533117 (-) |
| G65000 | NA | other | downstream | 577477 | 29381315 ~ 29405636 (-) |
| G64882 | NA | other | downstream | 1186157 | 28788580 ~ 28796956 (-) |
| AMCG00020661 | ss18l2 | other | downstream | 1654801 | 28325037 ~ 28328312 (-) |
| G64811 | NA | other | downstream | 1753466 | 28226535 ~ 28229647 (-) |
| AMCG00020694 | wwox | other | upstream | 466380 | 30449745 ~ 30531136 (-) |
| AMCG00020700 | NA | other | upstream | 739418 | 30722783 ~ 30737976 (-) |
| AMCG00020702 | NA | other | upstream | 817217 | 30800582 ~ 30808846 (-) |
| AMCG00020713 | NA | other | upstream | 1382298 | 31365663 ~ 31412823 (-) |
| AMCG00020746 | NA | other | upstream | 2138520 | 32121885 ~ 32122933 (-) |
