G65844


Basic Information

Item Value
gene id G65844
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34049996 ~ 34051069 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82324
ATGGTTTGGCCCTTAATTCTTTGTGGCACTCCAGTGTGACATCTGTGCTAATTCCACCAGACAGGTCCCGCTGCAGCAGGGCGGCCGTGTGCATCGTTAATTGAGCAATCAGGAAATTAAACGTCTCTCCTCGGGCAGCGTAACCTGGCAACCACTGCGAGGAGACATCGGTGCAAAAGTAAGCGCttgctgttttaatttcaggATGGAAACAATGtcacccccaaccccctcctCCAATCATTATTCGGTTCTTCTGCATGAAAATCTCACATCGTCGATTATAGTCATATAGAGAAATCCCCCAGACTGCACAGctcttcataaataaacaaacagtagGACCTGAGCAGTCTAGTATCAGACTTTCTTTCAAAACTTAACTTTCTCTCCTTTCCCCAAAAGCGAAATCCCTAGTGGGTGTGTGGGGCGACCTGAGCTGTATTCAGCTTTGAACCCCCACTTTTCGCTGTGATTTCCTTCATATAATGAATGTGGATCTTAAGGAACGTAGGTGAGCCCCCACAATCACAGTCCGGCCCCCTGGAGCGGCTGAGGGGCTGTGGGGGGACTTTCTGGTGGAATGAAAAGCACTTCTCACACCGGAGTGAATGAACCGATACCTGTCCggggtatgtttttattttttttatttaattttctttgatttactttttttaaagtattttttttagcaCTGATCTGATTTTCAAAGCACTGTCCCCCAACTGTTATCCACACATCAGGTTTTGTCCAAGTCAGCTTGTGATTGAGCAAGCAGTGACCTTTGAACTCTGTCACTTACACAAACAGGCAGCTACATTCCTTTGTTGAGTTTTTAATGATTGttctcagatttgttttttggttttctttcaggTTTTATAATATGTCAAGATGCAGTatgtaaaaagtgttttttttttgtttgtttttttctgtgtctcACTCTGTAGCTGTATTATGTATCATGTGAATACATAGCATATGTGGTACAacccacattttttttaatgttctgagataaataaaaaaataaataataataatgataaacaaaaaataaagacttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82324 True 1074 lncRNA 0.41 1 34049996 34051069

Neighbor

gene id symbol gene type direction distance location
AMCG00020805 NA coding downstream 22434 34023019 ~ 34027562 (-)
AMCG00020804 es1,LOC108430344,LOC107553036,LOC107714576 coding downstream 54271 33992809 ~ 33995725 (-)
AMCG00020798 NA coding downstream 126561 33915581 ~ 33923435 (-)
AMCG00020792 NA coding downstream 842220 33197632 ~ 33207776 (-)
AMCG00020790 NA coding downstream 893435 33146461 ~ 33156561 (-)
AMCG00020803 NA coding upstream 5885 34056954 ~ 34075604 (-)
AMCG00020807 NA coding upstream 61574 34112643 ~ 34113689 (-)
AMCG00020811 NA coding upstream 157840 34208909 ~ 34211086 (-)
AMCG00020813 NA coding upstream 165827 34216896 ~ 34220680 (-)
AMCG00020812 NA coding upstream 188820 34239889 ~ 34272166 (-)
G65815 NA non-coding downstream 67970 33981790 ~ 33982026 (-)
G65813 NA non-coding downstream 87805 33961177 ~ 33962191 (-)
G65776 NA non-coding downstream 197370 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding downstream 214482 33831735 ~ 33835514 (-)
G65753 NA non-coding downstream 775552 33274176 ~ 33274444 (-)
G65845 NA non-coding upstream 1391 34052460 ~ 34053108 (-)
G65858 NA non-coding upstream 65537 34116606 ~ 34116943 (-)
G65867 NA non-coding upstream 163988 34215057 ~ 34215559 (-)
G65872 NA non-coding upstream 167690 34218759 ~ 34220010 (-)
G65915 NA non-coding upstream 365588 34416657 ~ 34420190 (-)
G65756 NA other downstream 680891 33368625 ~ 33369105 (-)
G65679 NA other downstream 1158503 32886364 ~ 32891493 (-)
G65641 NA other downstream 1392977 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1439288 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 1490900 32554860 ~ 32559096 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 171246 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 757535 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 787692 34838761 ~ 34841323 (-)
G66054 NA other upstream 811550 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 1098499 35149568 ~ 35170179 (-)

Expression


Co-expression Network