G65858


Basic Information

Item Value
gene id G65858
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34116606 ~ 34116943 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82340
GACGAGACAAGTAGAAGAACACAAAGTGAGCTACTTAAAGACTTTCACACGTCTTCACTCGTTCAGCCGCTTCACTTTACTCTGGGTCTCCTGCGCCTCCAACTCCTCCAGCATGTTCGGGTGGGCTGGCAGGATCCAATGAGCATCTGAAACggggtttcttttattttgcgcACCGCAGTCATCACAACttgcacattttcctttttctttctgtctgtttctggACTGCCGTACTCCGGACTGAACGGAAGACAGtgcttttttgtattgattgggtttttatttccatttttttttttttttatgtttcatttcTGATCCCAAGAAGAAACGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82340 True 338 lncRNA 0.44 1 34116606 34116943

Neighbor

gene id symbol gene type direction distance location
AMCG00020807 NA coding downstream 2917 34112643 ~ 34113689 (-)
AMCG00020803 NA coding downstream 41002 34056954 ~ 34075604 (-)
AMCG00020805 NA coding downstream 89044 34023019 ~ 34027562 (-)
AMCG00020804 es1,LOC108430344,LOC107553036,LOC107714576 coding downstream 120881 33992809 ~ 33995725 (-)
AMCG00020798 NA coding downstream 193171 33915581 ~ 33923435 (-)
AMCG00020811 NA coding upstream 91966 34208909 ~ 34211086 (-)
AMCG00020813 NA coding upstream 99953 34216896 ~ 34220680 (-)
AMCG00020812 NA coding upstream 122946 34239889 ~ 34272166 (-)
AMCG00020815 NA coding upstream 173044 34289987 ~ 34314712 (-)
AMCG00020821 tmem150a,LOC106585116,LOC106580507 coding upstream 316482 34433425 ~ 34441728 (-)
G65845 NA non-coding downstream 63498 34052460 ~ 34053108 (-)
G65844 NA non-coding downstream 65537 34049996 ~ 34051069 (-)
G65815 NA non-coding downstream 134580 33981790 ~ 33982026 (-)
G65813 NA non-coding downstream 154415 33961177 ~ 33962191 (-)
G65776 NA non-coding downstream 263980 33805701 ~ 33852626 (-)
G65867 NA non-coding upstream 98114 34215057 ~ 34215559 (-)
G65872 NA non-coding upstream 101816 34218759 ~ 34220010 (-)
G65915 NA non-coding upstream 299714 34416657 ~ 34420190 (-)
G65957 NA non-coding upstream 397425 34514368 ~ 34515898 (-)
G66001 NA non-coding upstream 629998 34746941 ~ 34747361 (-)
G65756 NA other downstream 747501 33368625 ~ 33369105 (-)
G65679 NA other downstream 1225113 32886364 ~ 32891493 (-)
G65641 NA other downstream 1459587 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1505898 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 1557510 32554860 ~ 32559096 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 105372 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 691661 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 721818 34838761 ~ 34841323 (-)
G66054 NA other upstream 745676 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 1032625 35149568 ~ 35170179 (-)

Expression


Co-expression Network