G65867


Basic Information

Item Value
gene id G65867
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34215057 ~ 34215559 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82349
NTGTTGTCTTTCCCCTGTGCTGAGATGAAGTACCGGGTCATGCTGTGGGCTCCCCCCGCTCGATCAACTGCTTTTCTCCTCCAGCCCTGATCAGAAACGCGTGATCCGGGTTGAAGTCGACCCCCCCCAGCCGGACGATTTAGGTCCAACTCTAAACGCTCTGATAATGCAGAGAAGCTCctccacagagacagagagaggaggcgGTTTGGCAGCCCGGCGCCCGCTGGGGAAACGCACTGGCCCCGACCCTCCCATGTGTGAGTCCCTGCGCGGCGGGGGGGCCTGGCCTTTTCATGTGAACTCTCTTATGCGCCTTGTCTGTCTTTGAGTGAGACGCACAAGATCCCTGCTCTGAAGACCTCGTCCGGACTCGGGGGATCCCTGTTACTGAGGGGAACTAAAGTACAGGAGCACAGGGCTCGAGTATCCTTTCTTAGAAGTTACTGCCATTCAGTGTTACTGACCGGTGGATCTgctgtaataaaatgtttttttttaat

Function

GO:

id name namespace
GO:0036038 MKS complex cellular_component
GO:0044422 obsolete organelle part cellular_component
GO:0035869 ciliary transition zone cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82349 True 503 lncRNA 0.55 1 34215057 34215559

Neighbor

gene id symbol gene type direction distance location
AMCG00020811 NA coding downstream 3971 34208909 ~ 34211086 (-)
AMCG00020807 NA coding downstream 101368 34112643 ~ 34113689 (-)
AMCG00020803 NA coding downstream 139453 34056954 ~ 34075604 (-)
AMCG00020805 NA coding downstream 187495 34023019 ~ 34027562 (-)
AMCG00020804 es1,LOC108430344,LOC107553036,LOC107714576 coding downstream 219332 33992809 ~ 33995725 (-)
AMCG00020813 NA coding upstream 1337 34216896 ~ 34220680 (-)
AMCG00020812 NA coding upstream 24330 34239889 ~ 34272166 (-)
AMCG00020815 NA coding upstream 74428 34289987 ~ 34314712 (-)
AMCG00020821 tmem150a,LOC106585116,LOC106580507 coding upstream 217866 34433425 ~ 34441728 (-)
AMCG00020822 NA coding upstream 227727 34443286 ~ 34456490 (-)
G65858 NA non-coding downstream 98114 34116606 ~ 34116943 (-)
G65845 NA non-coding downstream 161949 34052460 ~ 34053108 (-)
G65844 NA non-coding downstream 163988 34049996 ~ 34051069 (-)
G65815 NA non-coding downstream 233031 33981790 ~ 33982026 (-)
G65813 NA non-coding downstream 252866 33961177 ~ 33962191 (-)
G65872 NA non-coding upstream 3200 34218759 ~ 34220010 (-)
G65915 NA non-coding upstream 201098 34416657 ~ 34420190 (-)
G65957 NA non-coding upstream 298809 34514368 ~ 34515898 (-)
G66001 NA non-coding upstream 531382 34746941 ~ 34747361 (-)
G66003 NA non-coding upstream 533568 34749127 ~ 34749329 (-)
G65756 NA other downstream 845952 33368625 ~ 33369105 (-)
G65679 NA other downstream 1323564 32886364 ~ 32891493 (-)
G65641 NA other downstream 1558038 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1604349 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 1655961 32554860 ~ 32559096 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 6756 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 593045 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 623202 34838761 ~ 34841323 (-)
G66054 NA other upstream 647060 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 934009 35149568 ~ 35170179 (-)

Expression


Co-expression Network