G65915


Basic Information

Item Value
gene id G65915
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34416657 ~ 34420190 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82420
CAGAAAAGATGCTCATACTGATTGGGAAAACGACTGGGGAGGGACGGTCAGAAGTCCTTTCGGTTTCGTGCGTGAGATTCGTCTCTCACCCACAAGTCCTGCGGTACTGCTGGCAGGCTGTGCGCACTCACGCCACTGTATGCTGTGCGGCCGTGTTTCCGACGTTGTACGGTTGCTAATTGCTCTGCAATAAAGGTTTGTCATTGGACGTATACTTGACCGTACCACTGGAGGATCCTGAGCTGGAGAAGGCCACCACCACCCCAATCAGGACGGCAATCACCACCAGGACCACCGCAACCACCAGCAGCTTCATCTTCATGTGCTCCCAGCGTTTCTTGCGGACCACCTTAGTCGTGGTCTTGACGAAGGTCTTGCTCTGGAGGGAGAAATAAAGAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82420 True 401 lncRNA 0.54 3 34416657 34420190

Neighbor

gene id symbol gene type direction distance location
AMCG00020815 NA coding downstream 101945 34289987 ~ 34314712 (-)
AMCG00020812 NA coding downstream 144491 34239889 ~ 34272166 (-)
AMCG00020813 NA coding downstream 195977 34216896 ~ 34220680 (-)
AMCG00020811 NA coding downstream 205571 34208909 ~ 34211086 (-)
AMCG00020807 NA coding downstream 302968 34112643 ~ 34113689 (-)
AMCG00020821 tmem150a,LOC106585116,LOC106580507 coding upstream 13235 34433425 ~ 34441728 (-)
AMCG00020822 NA coding upstream 23096 34443286 ~ 34456490 (-)
AMCG00020830 NA coding upstream 99010 34519200 ~ 34522321 (-)
AMCG00020829 LOC106531303,LOC108443303,LOC103397456,LOC105014365 coding upstream 109593 34529783 ~ 34553326 (-)
AMCG00020828 NA coding upstream 149422 34569612 ~ 34573502 (-)
G65872 NA non-coding downstream 196647 34218759 ~ 34220010 (-)
G65867 NA non-coding downstream 201098 34215057 ~ 34215559 (-)
G65858 NA non-coding downstream 299714 34116606 ~ 34116943 (-)
G65845 NA non-coding downstream 363549 34052460 ~ 34053108 (-)
G65844 NA non-coding downstream 365588 34049996 ~ 34051069 (-)
G65957 NA non-coding upstream 94178 34514368 ~ 34515898 (-)
G66001 NA non-coding upstream 326751 34746941 ~ 34747361 (-)
G66003 NA non-coding upstream 328937 34749127 ~ 34749329 (-)
G66004 NA non-coding upstream 329254 34749444 ~ 34750150 (-)
G66087 NA non-coding upstream 478594 34898784 ~ 34942966 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 176960 34222315 ~ 34239697 (-)
G65756 NA other downstream 1047552 33368625 ~ 33369105 (-)
G65679 NA other downstream 1525164 32886364 ~ 32891493 (-)
G65641 NA other downstream 1759638 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1805949 32607862 ~ 32610708 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 388414 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 418571 34838761 ~ 34841323 (-)
G66054 NA other upstream 442429 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 729378 35149568 ~ 35170179 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 924516 35344706 ~ 35349499 (-)

Expression


Co-expression Network