G65995


Basic Information

Item Value
gene id G65995
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34749498 ~ 34750151 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82516
ACACGTCGtccctcaaataaaataatcatgtaagaTGATAGTGACAGATCTGGGTTGTGAACCAAccgatgtttttttttttgaaaaatagggtgatggggtaTTTcgataaaatgtttgttttaaattatttttgtgacttttctgattttctccattcacttccagcaaagcagctccagagttaccACCTGTGTGATGTCATGGCATATTTCacgatctctgatttctgttgcatagaatgagctggacatggaacactcactgcacagaatatgtttctactaaTAGAATAACCTGTGAATTTAGAAACTGGAATTTCGGTGGAGATCCCCTTTAAGCCCTGCATATAATCaatttgaatgtgaattttAAATGTTGAGGAGCATAATATGGCTTACTGTACTGAAAACCAACCTGTTTGCATCCAAACATCATAAATGACAAGACAGACACCCATGACAAAAAACTTGatgcttttaatatttcttaaaacataagtatCTTGTGAAGCATTATGGTAGTTAAGTGTAAATTGCGCTTAATGTGGGGAAAATGCTCAACATGGCTTTACTGCACTTATAATGTAACCAcgtataccgatcagccataacattatgaccacctgcctaatattgtgttggTCCCCATTNN

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis
ko04927 Cortisol synthesis and secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU82516 True 654 lncRNA 0.36 1 34749498 34750151

Neighbor

gene id symbol gene type direction distance location
AMCG00020826 NA coding upstream 247296 34498286 ~ 34502202 (+)
AMCG00020827 NA coding upstream 256108 34481379 ~ 34493390 (+)
AMCG00020819 LOC107597267,LOC107654641,LOC107741205,LOC105890027,LOC107663217 coding upstream 273853 34462466 ~ 34475645 (+)
AMCG00020824 NA coding upstream 292597 34452211 ~ 34456901 (+)
AMCG00020825 NA coding upstream 297771 34450528 ~ 34451727 (+)
AMCG00020835 hk2,LOC106585103 coding downstream 100511 34850662 ~ 34865362 (+)
AMCG00020840 NA coding downstream 128539 34878690 ~ 34879805 (+)
AMCG00020842 NA coding downstream 131340 34881491 ~ 34892993 (+)
AMCG00020844 NA coding downstream 169667 34919818 ~ 34927630 (+)
AMCG00020843 camk2b1,LOC105905148,LOC102297714 coding downstream 184864 34935015 ~ 34936792 (+)
G65996 NA non-coding upstream 155 34749127 ~ 34749343 (+)
G65994 NA non-coding upstream 1384 34746893 ~ 34748114 (+)
G65978 NA non-coding upstream 17119 34676911 ~ 34732379 (+)
G65962 NA non-coding upstream 222423 34526867 ~ 34527075 (+)
G65956 NA non-coding upstream 233602 34514046 ~ 34515896 (+)
G66072 NA non-coding downstream 274852 35025003 ~ 35026229 (+)
G66151 NA non-coding downstream 416917 35167068 ~ 35170275 (+)
G66231 NA non-coding downstream 683117 35433268 ~ 35433558 (+)
G66258 NA non-coding downstream 802752 35552903 ~ 35553230 (+)
G66290 NA non-coding downstream 965894 35716045 ~ 35716249 (+)
AMCG00020820 NA other upstream 337878 34404534 ~ 34411620 (+)
G65830 tet3,LOC106906237 other upstream 690033 34059111 ~ 34059465 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 788916 33954806 ~ 33960582 (+)
G65705 NA other upstream 1641072 33107873 ~ 33108426 (+)
G65691 NA other upstream 1760053 32946731 ~ 32989445 (+)
G66008 NA other downstream 34061 34784212 ~ 34787474 (+)
G66060 NA other downstream 217693 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 397452 35147603 ~ 35149418 (+)
G66149 NA other downstream 413662 35163813 ~ 35164985 (+)
AMCG00020874 NA other downstream 997005 35747156 ~ 35750446 (+)

Expression


Co-expression Network