G66001


Basic Information

Item Value
gene id G66001
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34746941 ~ 34747361 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82523
TGGGACATCTTCCCAGACAATAATTCaaatggatttttaaagaaataaatctcTGCCCTGGCTACACCTGATGCTATATCTTAAAAGTGGCATATGTGTGAACAAATGGGTGTGGACCTGACACTGATGACCATTCTCACTGTATGCGGTAGTATCTCAGGATAGTGTGTGAGCAGAAATCTCATCGTACGCGTCTCACTATATAGTGTGTGCACCACGGAGTGAATTCCCTAATGGCGCCTCATACACAACACCCTCCACGTGCGATCATGTCTGTGACCTTCTTCTCCCATCTGTGCTGTGCGACGCCTGAGACGAAGGAGCTGGATTAAGAACTAGATCACTATAGCTTTTGGAaaatttatatttgatttatattgagGACTTTCCAATATCTCATCTTATAGAAGAATGATgctgt

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU82523 True 421 lncRNA 0.42 1 34746941 34747361

Neighbor

gene id symbol gene type direction distance location
AMCG00020834 LOC105015180,LOC106568058 coding downstream 5270 34729127 ~ 34741671 (-)
AMCG00020832 NA coding downstream 18577 34719704 ~ 34728364 (-)
AMCG00020828 NA coding downstream 173439 34569612 ~ 34573502 (-)
AMCG00020829 LOC106531303,LOC108443303,LOC103397456,LOC105014365 coding downstream 193615 34529783 ~ 34553326 (-)
AMCG00020830 NA coding downstream 224620 34519200 ~ 34522321 (-)
AMCG00020833 NA coding upstream 4018 34751379 ~ 34755314 (-)
AMCG00020831 LOC102225713 coding upstream 15832 34763193 ~ 34770642 (-)
AMCG00020839 mxd1 coding upstream 39910 34787271 ~ 34791056 (-)
AMCG00020838 NA coding upstream 70852 34818213 ~ 34826629 (-)
AMCG00020845 mrps24,LOC102797859,LOC106562909 coding upstream 142886 34890247 ~ 34891705 (-)
G65957 NA non-coding downstream 231043 34514368 ~ 34515898 (-)
G65915 NA non-coding downstream 326751 34416657 ~ 34420190 (-)
G65872 NA non-coding downstream 526931 34218759 ~ 34220010 (-)
G65867 NA non-coding downstream 531382 34215057 ~ 34215559 (-)
G65858 NA non-coding downstream 629998 34116606 ~ 34116943 (-)
G66003 NA non-coding upstream 1766 34749127 ~ 34749329 (-)
G66004 NA non-coding upstream 2083 34749444 ~ 34750150 (-)
G66087 NA non-coding upstream 151423 34898784 ~ 34942966 (-)
G66123 NA non-coding upstream 256217 35003578 ~ 35077562 (-)
G66126 ppia,LOC108241540,LOC100699155 non-coding upstream 332317 35079678 ~ 35095653 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 507244 34222315 ~ 34239697 (-)
G65756 NA other downstream 1377836 33368625 ~ 33369105 (-)
G65679 NA other downstream 1855448 32886364 ~ 32891493 (-)
G65641 NA other downstream 2089922 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 2136233 32607862 ~ 32610708 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 61243 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 91400 34838761 ~ 34841323 (-)
G66054 NA other upstream 115258 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 402207 35149568 ~ 35170179 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 597345 35344706 ~ 35349499 (-)

Expression


Co-expression Network