G66054


Basic Information

Item Value
gene id G66054
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34862619 ~ 34865305 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82585
TACTACAATATAAGTTTATTCCACCAGAGGGTGCTAGAGTTGTACAATAGATCATTTTCAATTAcaagctaattaaacaattgttaattatattagggaaaaaaataataaacaagaatCCCCAGCAGCATCATTCTTTGATCCAGTCTTTGCACAACGTCCGACCCGGGCAGAAGTACAGAAGACTGAAATCTACGTTCACAATTTGGCTCGGTTATCATAACCGTATATAGACAagcatagaaaaataaactgaaaggcTACGATGTATTATTTCTATTActctctatatttatttttacagattaaTAAACACTCGAAGACAGAGTGAAGTGTAGGTGGTTTATATTAAAACCGGGATCTGGCACTCGCTCCCAGCATCCAAACACTGCCCAGCGTGACTCCCTGCTCCTAAAAAGTATTAACAGGAAGCAATCTGCACACACCTGTCGCATGTGATGTAAAACAGTGAGCAAAGGAAGGCAGCGTAATCAGCGTTGCCGTTATTCCAGCACCATGGTAGCAGTCTGGGAAGAAGCACTTCTCAGACACAGCGGACCAGGGGTCAGGTGCAGATTGGGTCAGGTGACCTCACCAGGGTGGGAGACACGGGGAGCCCTTCTGGGGTGAGCACTGAGGACCACGGCATCAGAAGGAGTCTGGGCTGCAGTGCTTAGACAGGGCAGTTTGTGTGACCTAGCCCTACTGCAGGCAGTCCAGGCCAGCAGTCACAGAGAGCTGTAGCTGCACGTACATGtgcattattacaaaaatacagaaaaatagtCTGTGCCTGTGCTCATCTTATGTACaataaatatggttttattattCCGCTGTTATgacatgcattttatatgtgtAACTCCccctgtattgtattattgctgtGATTTTAAACTTCTACTCCGGTTTGCGTAGTGCAGGAACCACACAgtgtaaaaaactaaacacccccaaacaaaacaaccggcttaaacaaaaataaacagatgttgTGCATGCAGGCTGGAAATAAGGTACAACCGCCCCCAACAGCACGCCTCCACCCCACGCTGTCCCTGTCCCAGGTCAGACACGGGCCCCGGGGGAAGGGCTTTGCTCTTCTCCACACAATCGCATCAGATTCCCCTTTCAAACATTTTCAGCTAAAAAAAgggagtaaaataaaatacaatacatccAAGGATGACAGACAGATGGTCCCCTTCTTAGAAACCACTACCTCCTGCCCACCAGTCTCTCTATACCACAGGCCCTGCACAACCACACTGTCCCTTAAAAGGGGCTGTGCAGGGATAGAGGGATACAGAATGGTGTGCGgCGTTTCTGACCAGTGGAGCCACATAGTTAATTGTAAGGAAGTTGACTGGAAGCTACTGCTCCACCACAGTCCTGGGTCCTCGCCTccgtctctgtccctctctgccTCCCAGCCCCCGTCCTGTACTCCGATTGGCggatggggaggaggaggagggcctCAGTGCTGCCCCGCCTCCCTGATGCGACAGGCCACTGCGGTGATCAGGGCCGCCCCCTTGCCGCTGCCGTCCTCCGATTGGACGAAGGAGACGTCGCACTGCGGGGCCAGGTCCCGGACGGTCTCGTGCAGAACGGTGGAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82585 True 1628 TUCP 0.49 2 34862619 34865305

Neighbor

gene id symbol gene type direction distance location
AMCG00020838 NA coding downstream 35990 34818213 ~ 34826629 (-)
AMCG00020839 mxd1 coding downstream 71563 34787271 ~ 34791056 (-)
AMCG00020831 LOC102225713 coding downstream 91977 34763193 ~ 34770642 (-)
AMCG00020833 NA coding downstream 107305 34751379 ~ 34755314 (-)
AMCG00020834 LOC105015180,LOC106568058 coding downstream 120948 34729127 ~ 34741671 (-)
AMCG00020845 mrps24,LOC102797859,LOC106562909 coding upstream 24942 34890247 ~ 34891705 (-)
AMCG00020849 NA coding upstream 144586 35009891 ~ 35023812 (-)
AMCG00020854 NA coding upstream 220512 35085817 ~ 35099957 (-)
AMCG00020851 NA coding upstream 235702 35101007 ~ 35111425 (-)
AMCG00020852 NA coding upstream 259110 35124415 ~ 35127755 (-)
G66004 NA non-coding downstream 112469 34749444 ~ 34750150 (-)
G66003 NA non-coding downstream 113290 34749127 ~ 34749329 (-)
G66001 NA non-coding downstream 115258 34746941 ~ 34747361 (-)
G65957 NA non-coding downstream 346721 34514368 ~ 34515898 (-)
G65915 NA non-coding downstream 442429 34416657 ~ 34420190 (-)
G66087 NA non-coding upstream 33479 34898784 ~ 34942966 (-)
G66123 NA non-coding upstream 138273 35003578 ~ 35077562 (-)
G66126 ppia,LOC108241540,LOC100699155 non-coding upstream 214373 35079678 ~ 35095653 (-)
G66154 NA non-coding upstream 269673 35134978 ~ 35135563 (-)
G66181 NA non-coding upstream 387097 35252402 ~ 35252669 (-)
AMCG00020837 NA other downstream 21296 34838761 ~ 34841323 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other downstream 48325 34808604 ~ 34814294 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 622922 34222315 ~ 34239697 (-)
G65756 NA other downstream 1493514 33368625 ~ 33369105 (-)
G65679 NA other downstream 1971126 32886364 ~ 32891493 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 284263 35149568 ~ 35170179 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 479401 35344706 ~ 35349499 (-)
G66279 NA other upstream 785675 35650980 ~ 35692460 (-)
AMCG00020876 NA other upstream 829663 35694968 ~ 35696969 (-)
AMCG00020887 tmem127 other upstream 948568 35813873 ~ 35819830 (-)

Expression


Co-expression Network