G66123


Basic Information

Item Value
gene id G66123
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35003578 ~ 35077562 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82668
TGCATGGTCACTCGACCGATCACTTTGCCATCAACGGCGATATCAAAGAAGACTTGTGGGGTGGCCATTCTTGAAGATGTGGGGTTCTGGTTTCCTGCTAAAGCACTTCAATTGGGGATTCAGTCACAATCCGAGCCGTGCCACAGCTGAATCGGAACAAAAAGGGTGCCGGCTAAGGCTGAACATTTATACGGTGAAAGTCAGCCCCGGAGACTGGCTCAGCCAATGGGGAGAAGGCGATTCATTGAGTGGCGTAGCGCTTAGCCAATGACACGTCAGACAGGCAGATACACCCCAACCTCCGCCTCAGAAGGCGGTGAGCGGAAGTGAGAGGCAAGAGCTGTGACTTTTAGGGAACTTTGTGAATGATGGCCAAGTCGCTTGTCCAATCAGATTCAAATATAGTCGATGGGCGGGCCTTATCCACCCAACCATCAGTAGCTTGTTTCAAAATGTCTGGAAACTGGCGGCCATTAGGGCTCCACTCTCGGTTGCCTTTCGTAATGGCGCCAGTAACTGTATACTCTGCGTTCAGTGTAGTGcgcatgtaatttatttatttatataattagcTCCGCATCATGACTTGTGTGGGAAATATACATTAATCATCATTCGGAGAGAACATCCAAACGATTAATTCCAGACTGTGGTATCTGTAATTAACACAGTCGTTTTGTAAATTAGAACTTGTACTTATTTTGTAGCTCTTGTAGGAAACCCCGTCTGTGACGTCATTGTACACCTCCCATGTTATGAAGGCCTatcataaaaagtaaatgtaggAATTACTGTTGATATTCCACTGTCTGATAATGGTATAATCGATCGGGTATAAAAGTATTAAAACCTGCcgtattcaaatataaaacacataaaaacacctGATATTTGTGTATGTTAGCAATATAACTTCAGCgaatcttgtctgcacttgttaacTATTAGAATTAGGATATACGACATTTATtctatattaactgtatattttacccgtccacttatgtaattttgaaactaATTTGTATTAGGCCTGATTTGCACTTTTGCCCTGGACTAGGGCGTCTGCAATGAAATAAGGATGAATATATATGAAGTGAGCAAATTAAGTGCTATGTAaacttttacatatatatacgaAGATTATGAGGCAGgctaataatattgaatatgttggttattttatttttgtagctgtatgtattttaatttttaagtttCTGTTGGGTGCATGTGAATGGGAGGAATCCTGAACAGCGGCTCAACAGGAGTTATTCTGGAGTCAGTGGGAATTAGGGCAAAAGTATTATTGCACTGCAGAATTAACGCAAATTGTACATATGTACAGGTGACGGAAGAATACAAGAATTAAAAGGTCTGTCTGTcgtaaatatttgaatgaattcAAAAGTTTATCTTAATGCTGCTAGTTAGTAACGTCTTGTGGCTCCCTGTCCCACACTGTCGGTGCTGGATCTCTGCAGGTTTTGATGCACCTTTCATTTAGTAACGGATTAATATCTGGAAATAGTGGCTAGGTGATTAGTTCAATTATCTAATTCATGCCCTCTAGAGATTCCCATTATTTCCCATTATATTAATGAGTCGGTCCGAGACGCATTTAAGACATCAGGCACTCGCAGTCCTTATTTCAATTAGACCAAGATCCAAATGGCATTGAGAAGCACAGGCCAGACGTGGGCCCTCGAGGACCCTGGCTGACCCTCCATGGCCTGTCAGAACAAAAGGCTCTGAAGGCTTTTAAGAAAGTAGCTCCCTCCCACTTCATTTTCCGTAGGCCAACAGAGGCCCATGGAAAATGAAGTGAGAGGGAGCTACTTTCTAATAAGCCTTCAGGTTGATTTTGACCCCCTACCACACATGCACCTCCCACACAGACCATGGAACCATTGAGACAGACACACTGGGTACACCAATtatctttattaataataataattataataacattattaataataataaaaaagatgaatatGATACACATATAacttgaaacaaaacacagttgcACATCAAGGAACTCCCACTTGATCTGGGTCTTTATCATACAAACTGCGCAGAGCCAGCACCGAGTGAGGCAGCAGTCATAAATAATAAGATCAGACAGGGCTGGGAAAGGAACAGCTTTCCTCACTTCCTTCTGATTGTCCTCGGCAAGATCAAGACAGACAGGAAGTGAGCggcggagagagggagggagggagggtgtgtTCATATGCAGTCTCATtatagtgttttaaatatttacagggagaaaaatgtattgtgctttaaaaaaaataataataataataataataaatcatcctCTGCACATCTATTATGGTTATCCCAGATGTCATTGCTCTCCCAAGATCCTACCCAACGTTTCTTTTTAGTCCCCTTTAGTTatcataaatgtaacttgtTTGTTACTTGAAGTATTGATCCACAGTGTGCATTATAGGATTGAAAACCAATCAGGCCCGATGTCGTGATCTGGAGATGAAAGACAGCGCGGGCGGCGTGTGCATGTAAATCTGTCCTTCAAGAGTCAGAACGAGGACTCGAATCCTCAGAGTAAGAGATACatatacagaaacaaattaaaattgcaaataaaaaaataataaacagagtTGGGAAGGGATTCTGAAGAGCTCGGTGTGGAAATAAGGACAGGCCTGTTCTCTGGGTACATTTTACTCTCAACACCAGCTACTGAGCCACATGGAAACCAATCTCGGGATTTAAAATTTGCATCTTCTATAAAAAGGCTTCCTGTGGCCTAGATTCTCCAGATTGAggcagtgtcagtgtgggtcTGGGGGGCGAGCGCTCGTCTAAACACAGCTCCGGTGCAGTTTTCCCTTCAGTTTGGCCCTGCAGTGTTCCTAGACTTTAAGGAGCGACACGAGCGCCTCGACCCATTGAAGTCAATAGGCCGCTTAAATGGAAAGCTGCTTATGTCATTAACTTATTCGATAGTCAAGGTGTTTTAAGTAATTGGCCCCAGGGTTGAGTCTCGGAGGCCCATTAGATGGTGCTTTAAGTACTGCAGTAATTTTGCACTGGGCAGGCAGCAGCTCCGGCTGGCACCAGTATCCAGGCAGCAGTCGCCCACAGTGCCGTCTCGCAGGGCAATGCCGTGGGACGGGGCGGGCGGCACTCGGCTCAGACTGGGTGAAGCTGGTCCGAGAGGCTGCAGAGCTGTGGCAGGCTGCACGGAGGGAGGCCTTGGTGTCTTtccactgcattttaaatgtctacACTGTTGATATTATAAATTAAAGAGGCagggaaactaaataaaatgcaactttCTGTGGGAAGGCCGAGCTCAACTGCATGTGCACGAAGGGGAGGACTGCGTTGTGTCGCCGCGCCCTCACAGACAGGACGGGGGTGAAGACGAGAATAGCACCTGGCCCTCTCCTGCTATACGAGTGAACAGACCGTGAAGCAGAAGTGGTCCTGGATCCCGGAGATGCGTTTCCCAATGCTGTGGACCCAGGGAGCAGTTTGTCCTCAGCCCAACAGCCAGGGGCCAAATCCAGCCAAACCAGAGGAGTTCACATCACAGCAGGCACCAGGCCTCAGTCATGAACTGCCAGTGACAGGAGCGAAGGAGTAAAAACACTCGGGTCTGTCATTAGGTCACGATgcatttctgtcttttcttttcggTTTAAAATCACATCAAATAGGAAACCCTGTTCCggtcaaattaaaattaagaacgAATACAAATGTGCTTCACGTTAACGATGCCCAGCGTGTTGGGTATTGTGCTCTAGTACTCCGTGCGtatcacacacaatcacacacacaccctgcttGTGCCACTGACTCTGGAGGACTGCCAGATCGGGGAGCAGTcggagaggggggaggggaggggaaggtGGGACAAGCAAATAAACAGATTGACCTTTAGACTCTCACCCTGTAGGGTAGACTCCAGGTCTGTGCCAGAGCGGCAGACAGACTGGGGCagtggagagaggaggaggagggagggagacgaCGACACACAAATCGCAACGGAGGGTTTAGTCACACAGCGTTCTGTGGCAGAGCTCACTTCGTCCAAGCCTTTATATGGACAAGAAAGGAGAATTGCTTATGGTTTTATGGCAACCTATGAATAAATGACTCCGTGAGCATCCAAGATTGCGGTTGCCTGGCCTCTCGCATGCGTCCCTTCACAAGACACAGGCTGCCACTACAGTCCAAGCTTCAGCTGCCAATCCTCAGCACACAAAGCTGCACTTTTGTGGGTCTGCTTCTACCCAGTGGCAACCTCCCATGAGGCCCAGGGAATGGCAGGCGCAGCTAGGTTTGATGTCTTGATTTTAATCCATGAcgcagttaaaaaatatatataaatggaccaaagaaaaaataaaaataaagtcaaacaCAATCTTGTTTGGTCTCTCGAGTGGGGCGGGGGTACtgggtgattaaaaaaaaaaaaaaaagcctttttgtTTAGAGGGCCTGGGAAACTTGAACTCAAATTGACATGAAATACATTGAAGCCAGTTCAGCGATGAGCATGTCACCCTGCTCTACAGAGGATCGTCGCAGGCTAGAGAACAGGAGTCTGAGGAGAAAACGAAATTCAAAAACTGTGGCTGGACACGGCGCGATGAGACGCCTCCCACTGGACCTCATCGAAGTGGGACAGGTGGTCAGGCGGGCGCTCAGTACAGCTCTGGGATCAATACAATGCTCTACTTTTTCCtatagattttttgttgtttgttgtcttctaaagaagaaatatatataaaaaacatacaaacaaaacaatttaaaaccatttctcgcacttttaaaacaatttctttCCCCAGAACACCCCCCTCAGGGACAGTCCTGGGGGGCGATGGCCTGTGGTTCCGGGACCAGGTTGTGCAGCGTGGTGGCATacaggtaaaaaataaaataaaaatgcttataAAATAAGAAGAGGACACCCCTGCTGGAGCCAGAGGTGGCACCGGAAGACGACGTCTGGGCACAGGGGCAAGCACCTGCGTGCGGCAGTGTGGAGCCCATGGAGTCGGGGTCTTGGGTGCGGGCACAGGTGGGGCGGTGGAGGGCCCTGGTCAGCAGTATGGTCTCCCCCTGGTTCCTGTCCGTCTCAGCTGGAAGTTTCCAGATTATGGGACAATTTCTattcttcctttattttttccttcctttttatttttaaaaatgttgttccTTCATTCATCGATTACATTTAGTAACTACATTAAATTTAATCTTTTGTGGGTTTTGTAGTCCTCAATTGTTGCCCCCATCCTCTGCCCTCAACTCTGAGCCACACTGCCCCTCTGCAGAAGCAGGGTTGGCCGATTGGCTACCCCACCACCTTCATCACCACCAAAGGAACGCCGCAGTCAGAGACCTGCCCTAAAGGCTGCTGAGAGATGCTATTTGCAGTGGCACACATGGATACAAATGCCAGACTCACATGACAGTGGCTGTGATGgcttttggggggggggggggggggttNNGGTTGCTCTGAGCGCTGCCGTGCGAGTCCGGGAGCGGTGTGTGGGACGgaggaggagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaggaggaGGTAGGGAGCTGCTCAATGCGACTGATGGCAACCTGGGCCTCCAGCCCACGGGTCTTACGCTCCCGGGTCAGTTCATAATACACCTTCCCTGTGCAGAAGATGACGCGCCGCACCCCCTCTGGGGCCTGTGCTGCCGCCCCATTGTCCGGGATGAGGCGCAGGAAGCGAGTCCCTGCAACACACGCAGAGTCAGCTCCTCAGAGATGCCTCActgatggacacacacacaggtactgCCAGTAGGTATCTGTGTAGTTACAGTACGAGTGCATGtgtacagtgtctcagtgtgtgtatacagtgggGGACTCACCGGGCAGCATGTCATCAAAGCTGGACTTGGCCTCAGGGTGTCTCAGCAGGGACTTGGGGGTGAAAATGATCAGCTGaggacaaacacacaagagTATAAACACAACCGCACAGCAGGGCAGTGGAACCCCCTACCTGTGCCAGGCTCTGCAGTCGGGTCTGTCCCCCGCGGCTCTCTTACCGGCTTCCTGAAGGGCTGCAGGATCTGCCTCCTCAGCACATGGAAGTAGTTGGCCGGGTTGGAGCAGTTCACCACGATCCAGTTACAGTCGTACAGCTGACGCACCGCAAAGTCCTCCGAGATCTTCTGCAAGGGGAGCCAAGTCAGAACAcgattacaataaaataaaaacctcaaaAATATATCtggatatgtatgtattttatgagTTATTTTTATATCACAATAAAGAGTCAATAAGGTGCAACCAGCTGAACCATCAAACACAAACTGTCAAAACAGGGTGAGTTGGAAGGCACTGCTTTGCATTGTGGGAAAGATGGCTAAAGGCTGCATGTGACCTACTGGAAGCACATCTGGGTCATCGTTGCACATCTGCAGGAACCTCTCTGGGCGAGCGGACGAGTGCTCTGGACCCTGCGCAGATAGAGAGAGTTGGGGGttagagaagaagagagagagaggagagactatCCACGCCAGTGCAATCCACGGGCCGTACCATTCCCTCCATGCCGTGGGGGAGCAGCAGCACGATGCCGTTCTGGCGCACCCACTTGGCCTGGCCGGGGCAGATGAACTGGTCGATGATGGCCTGCGCGGTGTTGTGGAAATCCCCGAACTGGGCCTCCCACAGTACCAGGGCATTGGGGCTGGCCATGGCGAAGCCCAGTTCAaatcctggaggaggaggagaagagagagaaagagggaggaggaCAGGAGCGAGAGGGAAAGGTTACAGTACACGTCTGCCCCAGCAGGAGCTGGTGCTGTGTGAGCGGGTTTTTCATGGCAGCAGGGCTCACCCAGGACGCCATACTCGGACAGGGAGCTGTTGCACACGGTGTAGGGGGCCTGGTTGGCTGAGATGTGGTTCATGGGAATGCAGGTCCTCTTGTCCACGTTCTGATCGTGCAGCACATGGTGACGATgactgaagagagagaggaaaaaaaataaaaaaaaaaaataaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82668 True 7117 lncRNA 0.48 4 35003578 35077562

Neighbor

gene id symbol gene type direction distance location
AMCG00020845 mrps24,LOC102797859,LOC106562909 coding downstream 111873 34890247 ~ 34891705 (-)
AMCG00020838 NA coding downstream 176949 34818213 ~ 34826629 (-)
AMCG00020839 mxd1 coding downstream 212522 34787271 ~ 34791056 (-)
AMCG00020831 LOC102225713 coding downstream 232936 34763193 ~ 34770642 (-)
AMCG00020833 NA coding downstream 248264 34751379 ~ 34755314 (-)
AMCG00020854 NA coding upstream 8255 35085817 ~ 35099957 (-)
AMCG00020851 NA coding upstream 23445 35101007 ~ 35111425 (-)
AMCG00020852 NA coding upstream 46853 35124415 ~ 35127755 (-)
AMCG00020860 NA coding upstream 111958 35189520 ~ 35197646 (-)
AMCG00020861 NA coding upstream 158189 35235751 ~ 35238599 (-)
G66087 NA non-coding downstream 60612 34898784 ~ 34942966 (-)
G66004 NA non-coding downstream 253428 34749444 ~ 34750150 (-)
G66003 NA non-coding downstream 254249 34749127 ~ 34749329 (-)
G66001 NA non-coding downstream 256217 34746941 ~ 34747361 (-)
G65957 NA non-coding downstream 487680 34514368 ~ 34515898 (-)
G66126 ppia,LOC108241540,LOC100699155 non-coding upstream 2116 35079678 ~ 35095653 (-)
G66154 NA non-coding upstream 57416 35134978 ~ 35135563 (-)
G66181 NA non-coding upstream 174840 35252402 ~ 35252669 (-)
G66228 NA non-coding upstream 351622 35429184 ~ 35429394 (-)
G66232 NA non-coding upstream 355716 35433278 ~ 35433565 (-)
G66054 NA other downstream 138273 34862619 ~ 34865305 (-)
AMCG00020837 NA other downstream 162255 34838761 ~ 34841323 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other downstream 189284 34808604 ~ 34814294 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 763881 34222315 ~ 34239697 (-)
G65756 NA other downstream 1634473 33368625 ~ 33369105 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 72006 35149568 ~ 35170179 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 267144 35344706 ~ 35349499 (-)
G66279 NA other upstream 573418 35650980 ~ 35692460 (-)
AMCG00020876 NA other upstream 617406 35694968 ~ 35696969 (-)
AMCG00020887 tmem127 other upstream 736311 35813873 ~ 35819830 (-)

Expression


Co-expression Network