G66228


Basic Information

Item Value
gene id G66228
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35429184 ~ 35429394 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82807
CACAGTGCCCATGGACAACAGCTGGACTCATGCTGGAGCTGTAGTGCACACTGGACCTGGCTATTAGTGCAGGTGTCACTACCATGGTGTATTGTTTATCTTCGTGTGTTGGTGGTAAATTGACAGGTTGTATTTCCTCCCTCAGGTTGCTGTGGCGGTGCGTGACTGAGCCAGGTCTGGGTGAGGGTGGCAGGGCAGAGACAGGGGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82807 True 211 lncRNA 0.54 1 35429184 35429394

Neighbor

gene id symbol gene type direction distance location
AMCG00020865 NA coding downstream 56928 35361459 ~ 35372256 (-)
AMCG00020866 NA coding downstream 119113 35300385 ~ 35310071 (-)
AMCG00020862 NA coding downstream 172984 35253794 ~ 35256200 (-)
AMCG00020861 NA coding downstream 190585 35235751 ~ 35238599 (-)
AMCG00020860 NA coding downstream 231538 35189520 ~ 35197646 (-)
AMCG00020871 LOC104941581 coding upstream 10635 35440029 ~ 35445018 (-)
AMCG00020870 LOC102300863 coding upstream 17460 35446854 ~ 35485425 (-)
AMCG00020873 LOC105027009,LOC106585261,LOC106580343 coding upstream 157427 35586821 ~ 35591343 (-)
AMCG00020877 NA coding upstream 189230 35618624 ~ 35631985 (-)
AMCG00020881 NA coding upstream 207656 35637050 ~ 35658112 (-)
G66181 NA non-coding downstream 176515 35252402 ~ 35252669 (-)
G66154 NA non-coding downstream 293621 35134978 ~ 35135563 (-)
G66126 ppia,LOC108241540,LOC100699155 non-coding downstream 333531 35079678 ~ 35095653 (-)
G66123 NA non-coding downstream 351622 35003578 ~ 35077562 (-)
G66087 NA non-coding downstream 486218 34898784 ~ 34942966 (-)
G66232 NA non-coding upstream 3884 35433278 ~ 35433565 (-)
G66259 NA non-coding upstream 6896 35436290 ~ 35502312 (-)
G66284 NA non-coding upstream 273369 35702763 ~ 35703073 (-)
G66327 NA non-coding upstream 342090 35771484 ~ 35771686 (-)
G66416 NA non-coding upstream 497144 35926538 ~ 35937258 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other downstream 79685 35344706 ~ 35349499 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other downstream 259005 35149568 ~ 35170179 (-)
G66054 NA other downstream 563879 34862619 ~ 34865305 (-)
AMCG00020837 NA other downstream 587861 34838761 ~ 34841323 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other downstream 614890 34808604 ~ 34814294 (-)
G66279 NA other upstream 221586 35650980 ~ 35692460 (-)
AMCG00020876 NA other upstream 265574 35694968 ~ 35696969 (-)
AMCG00020887 tmem127 other upstream 384479 35813873 ~ 35819830 (-)
AMCG00020900 NA other upstream 546370 35975764 ~ 35986712 (-)
AMCG00020911 NA other upstream 831599 36260993 ~ 36282529 (-)

Expression


Co-expression Network