G66258


Basic Information

Item Value
gene id G66258
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35552903 ~ 35553230 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82838
CCTTGCGCTTGCGGTCTCGGGACCGGTTCCTCTTGtacttcttctcctcctctttctccttctgCTCCTGAGCCGCCAAGGCTTCCAGGTCCTTGTTCTTGCGGAGCTGCTTCGCTGCCTGTGCCATGCTGCCCGCGGACTCTGTACCCTCCCAGGTGGACTGGCTGCAAACACATCAACCACTGGAGCCCGAGCTTCCTCTCGGCTCCGCACTCGCCCCTCGCCTGCACGCTCTCCACacgctggctggctggctggctggctgtgaAGAGGGCTCCTCCAGTTTCTCGCTCTCTCGCgttctctccccccccctcctcgATTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82838 True 328 lncRNA 0.63 1 35552903 35553230

Neighbor

gene id symbol gene type direction distance location
AMCG00020872 NA coding upstream 136058 35416052 ~ 35416845 (+)
AMCG00020869 NA coding upstream 140108 35405143 ~ 35412795 (+)
AMCG00020868 NA coding upstream 151379 35376270 ~ 35401524 (+)
AMCG00020863 LOC102779543,LOC108260282,LOC102217523,LOC106917416,LOC103149690,LOC106950839,LOC103473804,LOC101061943 coding upstream 196387 35354706 ~ 35356516 (+)
AMCG00020864 NA coding upstream 265085 35277860 ~ 35287818 (+)
AMCG00020875 NA coding downstream 174522 35727752 ~ 35736989 (+)
AMCG00020883 LOC106579887,LOC106585549 coding downstream 266926 35820156 ~ 35827073 (+)
AMCG00020884 NA coding downstream 298409 35851639 ~ 35859695 (+)
AMCG00020891 NA coding downstream 356122 35909352 ~ 35926494 (+)
AMCG00020893 tmed4,LOC107093818,LOC106566412,LOC101466713,LOC102209141 coding downstream 377392 35930622 ~ 35937150 (+)
G66231 NA non-coding upstream 119345 35433268 ~ 35433558 (+)
G66151 NA non-coding upstream 382628 35167068 ~ 35170275 (+)
G66072 NA non-coding upstream 526674 35025003 ~ 35026229 (+)
G65995 NA non-coding upstream 802752 34749498 ~ 34750151 (+)
G65996 NA non-coding upstream 803560 34749127 ~ 34749343 (+)
G66290 NA non-coding downstream 162815 35716045 ~ 35716249 (+)
G66319 NA non-coding downstream 204878 35758108 ~ 35761032 (+)
G66325 NA non-coding downstream 215011 35768241 ~ 35768571 (+)
G66342 NA non-coding downstream 245480 35798710 ~ 35857028 (+)
G66348 tmem127,LOC106585551,LOC107713035,LOC107699648 non-coding downstream 260513 35813743 ~ 35817779 (+)
G66149 NA other upstream 387918 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 403485 35147603 ~ 35149418 (+)
G66060 NA other upstream 544581 34967844 ~ 35008322 (+)
G66008 NA other upstream 765429 34784212 ~ 34787474 (+)
AMCG00020820 NA other upstream 1141283 34404534 ~ 34411620 (+)
AMCG00020874 NA other downstream 193926 35747156 ~ 35750446 (+)
G66362 NA other downstream 314163 35867393 ~ 35908402 (+)
G66506 NA other downstream 701469 36254699 ~ 36256511 (+)
G66551 NA other downstream 1361585 36914815 ~ 36917436 (+)
AMCG00020942 NA other downstream 2013806 37567036 ~ 37575856 (+)

Expression


Co-expression Network