G66279


Basic Information

Item Value
gene id G66279
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35650980 ~ 35692460 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82874
CACCCCCCCCCCNNNNNNNNNNGAGTCGGGGAGCTCTTCGCCTGCATCATCGCCACGCAGTTCCAGAAAATCCGGAACGGCGACAGGTTCTGGTGGGAGAGGAAGGAAGTTTTCACCAGCACGCAGCAGGCCGCCCTCCGTGGTGTCAAGTTAGCCAGGATCATCTGCGACAACACGGGGATCACAGACGTCCCCAGCGACCCCTTCCTATTCAAATCCCGTGGCCAGGGCTACACCAAATGCTCCAGCTTCCCTACTTTCAACCTGAACCCCTGGAAGGAAGTAAAATGAGTGCAGACAGTGactgtatacatataaacatttacatatatcaTCACCATAAGCCTGCagcgatccactgctggatgaaggcctccccaagatgtttccacttgtttcgacCTATAGCTCCTATTTTCCATGCCAAGTCTGCAAAGTTTATTGATTCATATTTCCAATATTTTATGTAGTCTTAATCTATTGGGATCTACAACCCCatgttgtatacatatatacacttcacactattacatatatttaaatatttgtgtctattattattttttttggtatgtatttcttttttaataattttcaagCTTTCTGGTCATCCCATGATGTGATTTATGCAAAacagcaatgtttttaaatgataataagtttgaatttgtatatataactCTCTgcattgaaattgtaatttcaatatcaatataatgtaaatatatatatatatataaaataaaagt
>TU82875
NNNGGCACGGCGACTGATACAGTTGTACGGGACCCCTGACAACATCGACGTCTGGCTTGGGGGAGTGGCTGAACCTTTTGTGAGGGGGGGGCGAGTCGGGGAGCTCTTCGCCTGCATCATCGCCACGCAGTTCCAGAAAATCCGGAGCGGAGACAGGTTCTGGTGGGAGAGGAAGGAAGTGTTCACCAGCAATCAGCAGGCCGCCCTCCGCCGAGTTCGGTTAGCCAGGATCATCTGTGACAACACGGGGATCACAGACGTCCCCAGCGACCCCTTCCTGTACAGCCCCCGCGGCCAGAGTTACACCAGATGCTCCAGCATCCCCACCTTCGACCTGAACCCCTGGAAGGAAGCAAATTCTTCCGGATCCAGCCCACCCCCTGGACACAAAACCTACACTGGACAGCATGGACCCCAGGGTGCAGAGGGACCCAGAGGAAATCCTGGACCACTGGGGGCCCCAGGTCTGCAAGAAGCCAAGGGCCcgcggggagagagagggccTCCCGGTCTCGCCACCAACCTCCCGAAGTCTGCCTTCTCCACCCGGCTGGGCTACAGCAACCCCCCCCCAGACCGCCCCATCGTGTTCCGGGAGACCATCTACAACGGGCAGAACCATTACGACAACCAGACAGGGGTGTTCACCTGTGTCTTGCCCGGTGTGTACGAGTTCAACTTCTCCTGCAGGCTGTACAGGAATCTGGGCAACATTGAGCTGAAGAAGAATGGTGTGAACGTTGGGCACTCCATCAGCTCCTACAGTGGGGGCTACATCAGCGCCACAGGCAGTAGCATGGTGCCATTGGAGCAGGGAGACCAAGTCTGGCTGCAGTCCAGCTCCGGTGGCAACACCCTGACCGCAGAGAGCTTCTTCTCGGGGCACCTGATCTTCTCTGTGTAAATTGTGCACACGGCCTGTCactttctgtcttttcttttaattcatttaagaTCAGAATTACTTTTATATAATGCGTTTATGTTTTGATTCTAAATTTGTATCCCATAAATCTTATGCCTCAACTGTAGCAAGCTttcaatagaaaatacattaaaaaaaaaaaatcccaaaagtctggtaaagtttttaaaaatgaaaagtcaaTGAATGTTATCTTTGTCTTCTGACTGCAATTCACTGGAAGTGTAAAACAGCAGAATTCCTACTTTTACCAAAACCATATTGGGATTCCTGGAAACATAAATAAGTGTAATAAAGTATAAGGTGAATAAACaagttattaatatatatataatagctcAGAGAGGTAATGTCATTTTCAGGCTTCCTGATCATCCCATGAAGTAATTTATGCAAATAAGCTTTGttaattatgataatttaatctcaattattattgaatattttttttaatataaaaagtctctgcatttaaattgtaatgcatGCAATGTAAGGCAAATAACtatcaaataaaagtaattaaaatacaagataaAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82874 False 749 lncRNA 0.39 3 35650980 35692460
TU82875 True 1465 TUCP 0.47 4 35679432 35684555

Neighbor

gene id symbol gene type direction distance location
AMCG00020877 NA coding downstream 18995 35618624 ~ 35631985 (-)
AMCG00020873 LOC105027009,LOC106585261,LOC106580343 coding downstream 59637 35586821 ~ 35591343 (-)
AMCG00020870 LOC102300863 coding downstream 165555 35446854 ~ 35485425 (-)
AMCG00020871 LOC104941581 coding downstream 205962 35440029 ~ 35445018 (-)
AMCG00020865 NA coding downstream 278724 35361459 ~ 35372256 (-)
AMCG00020878 usp39,LOC106585262,LOC106580344 coding upstream 47585 35740045 ~ 35746487 (-)
AMCG00020880 mat2a,LOC102784064,LOC101478089,LOC105026123,LOC106580346 coding upstream 67391 35759851 ~ 35765430 (-)
AMCG00020886 NA coding upstream 86583 35779043 ~ 35790548 (-)
AMCG00020889 NA coding upstream 108825 35801285 ~ 35810870 (-)
AMCG00020885 snrnp200,LOC106585548,LOC106579886 coding upstream 134822 35827282 ~ 35847057 (-)
G66259 NA non-coding downstream 148668 35436290 ~ 35502312 (-)
G66232 NA non-coding downstream 217415 35433278 ~ 35433565 (-)
G66228 NA non-coding downstream 221586 35429184 ~ 35429394 (-)
G66181 NA non-coding downstream 398311 35252402 ~ 35252669 (-)
G66154 NA non-coding downstream 515417 35134978 ~ 35135563 (-)
G66284 NA non-coding upstream 10303 35702763 ~ 35703073 (-)
G66327 NA non-coding upstream 79024 35771484 ~ 35771686 (-)
G66416 NA non-coding upstream 234078 35926538 ~ 35937258 (-)
G66499 NA non-coding upstream 543312 36235772 ~ 36236927 (-)
G66527 NA non-coding upstream 1055055 36747515 ~ 36747743 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other downstream 301481 35344706 ~ 35349499 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other downstream 480801 35149568 ~ 35170179 (-)
G66054 NA other downstream 785675 34862619 ~ 34865305 (-)
AMCG00020837 NA other downstream 809657 34838761 ~ 34841323 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other downstream 836686 34808604 ~ 34814294 (-)
AMCG00020876 NA other upstream 2508 35694968 ~ 35696969 (-)
AMCG00020887 tmem127 other upstream 121413 35813873 ~ 35819830 (-)
AMCG00020900 NA other upstream 283304 35975764 ~ 35986712 (-)
AMCG00020911 NA other upstream 568533 36260993 ~ 36282529 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other upstream 1327551 37020011 ~ 37045939 (-)

Expression


Co-expression Network