G66284


Basic Information

Item Value
gene id G66284
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35702763 ~ 35703073 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82885
actccccttcatctcctccctcctcaattcctccctcctctctggctgtttcccctctgcattcaGATAAGCTGCTGTGATCCCACTCCTccagaaacctacccttgaccccacctctcctcagaactactgccctgtctccctactccccttcctctcaaacaCCCttgagcgggcggtccaccgtcagttctctgcatttctttcccatcactcactccttgatcctctgcaatccggcttccacacagTTCACTCTACTGAGACGGCTCTcttggctgtcactgactccctcagctgtgctcgagcgg

Function

GO:

id name namespace
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901607 alpha-amino acid biosynthetic process biological_process
GO:0008652 cellular amino acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82885 True 311 lncRNA 0.56 1 35702763 35703073

Neighbor

gene id symbol gene type direction distance location
AMCG00020879 NA coding downstream 12423 35679433 ~ 35690340 (-)
AMCG00020882 NA coding downstream 26863 35671530 ~ 35675900 (-)
AMCG00020881 NA coding downstream 44651 35637050 ~ 35658112 (-)
AMCG00020877 NA coding downstream 70778 35618624 ~ 35631985 (-)
AMCG00020873 LOC105027009,LOC106585261,LOC106580343 coding downstream 111420 35586821 ~ 35591343 (-)
AMCG00020878 usp39,LOC106585262,LOC106580344 coding upstream 36972 35740045 ~ 35746487 (-)
AMCG00020880 mat2a,LOC102784064,LOC101478089,LOC105026123,LOC106580346 coding upstream 56778 35759851 ~ 35765430 (-)
AMCG00020886 NA coding upstream 75970 35779043 ~ 35790548 (-)
AMCG00020889 NA coding upstream 98212 35801285 ~ 35810870 (-)
AMCG00020885 snrnp200,LOC106585548,LOC106579886 coding upstream 124209 35827282 ~ 35847057 (-)
G66259 NA non-coding downstream 200451 35436290 ~ 35502312 (-)
G66232 NA non-coding downstream 269198 35433278 ~ 35433565 (-)
G66228 NA non-coding downstream 273369 35429184 ~ 35429394 (-)
G66181 NA non-coding downstream 450094 35252402 ~ 35252669 (-)
G66154 NA non-coding downstream 567200 35134978 ~ 35135563 (-)
G66327 NA non-coding upstream 68411 35771484 ~ 35771686 (-)
G66416 NA non-coding upstream 223465 35926538 ~ 35937258 (-)
G66499 NA non-coding upstream 532699 36235772 ~ 36236927 (-)
G66527 NA non-coding upstream 1044442 36747515 ~ 36747743 (-)
G66535 NA non-coding upstream 1147997 36851070 ~ 36851636 (-)
AMCG00020876 NA other downstream 5794 35694968 ~ 35696969 (-)
G66279 NA other downstream 10303 35650980 ~ 35692460 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other downstream 353264 35344706 ~ 35349499 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other downstream 532584 35149568 ~ 35170179 (-)
G66054 NA other downstream 837458 34862619 ~ 34865305 (-)
AMCG00020887 tmem127 other upstream 110800 35813873 ~ 35819830 (-)
AMCG00020900 NA other upstream 272691 35975764 ~ 35986712 (-)
AMCG00020911 NA other upstream 557920 36260993 ~ 36282529 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other upstream 1316938 37020011 ~ 37045939 (-)
AMCG00020922 NA other upstream 1358522 37061595 ~ 37067805 (-)

Expression


Co-expression Network