G66348 (tmem127,LOC106585551,LOC107713035,LOC107699648)


Basic Information

Item Value
gene id G66348
gene name tmem127,LOC106585551,LOC107713035,LOC107699648
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35813743 ~ 35817779 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82960
GCAGTATCTTGACATATGATTGATAACATCCAGAGGAGAAGGCTTCACAATTTATATATGTTCTCCCTTATTTGTTAACATTTAACTGCTGGCATAAAATGATACACACAGAAGCCCAAAGTGTCTTCAGTCAATTGAGGTCTTTGAAGTACTGGGCAGAGATTATGGCTAAGCAGAATCCAAATCtggaaaagacagaaataagAGATGCTCATACAAACAACTGCACTCACCACTGGATCACGTGTGTTTATTTCGTCTCaccaagtaaaaaaacaaaaaagagcaaaataaagTGACAATTAAAAGCCTTACAGATTAACACAAAATCAAGTCTTACCGCACAGTTCACACTCGCACTAACACCAaatgaatagtaataataaacagaacagTACAAAAGAGagatagtaatatatatatatatatatatatatatatttaaaacaacagcaaatggatcacatttaaaattaaataaaagcaaatgatTGGATGTTTTCTGGTGGCAATTTTCAATTCTCGTCACTAATTTACATACTGGTAAACTGGCAGAACGCCTGGCTTGTCAGTTGCAAAAAATCATGCAGGAGATATtgtagataaaaataataataaatacaaataaacaacacaatctTGTTGAGGTGACGAGGCAGTGTACAGAGTGTGTGATTTTGTATAGAAAAAAAGTTGGTGGCTTTGTTTACAGCACACATATGAACCACACCAGACTGTAGGAACCCTCATGTGATTTGGGCCGGGTTTCCATTTGTCACTGGGATCAAGTTGAATGTTATCCGAGACCCCAACCACCTCCCCCGCCTCAACCAACATGTCTGTATGGACTCCACAGCAAACATGCAGGCTTGTAAACGCACACAAAAGGTGTTAAAATCCCAGGCAAGGTGGTGGGAGGAGGCAGTGGCCTAGCAATTGTGCAGGAGATATTTATTTTCGttggtaaaatatatttattgcattaagGGTCCTGGATATTGAAAGAGGAGAAAGTGACAGGAAACCAGCTCCCAAATTAACAAGGTCCATTCATTACAACCACTTGAGCCACAATCCCAATCTGTCCCATAACGGCTGAAATTCTGCCAAGTGTGGAAGAGGTGGAACACATTCAAACAGATTTCATAGACACGCCCTCACGGACCATCACACCGTCTGATGACTGTCGTTCAGGTGCAGCACTTTAACACAAACCAGTCCCATCAAACATgtcattttagttttgaaacgcaatcaaaaatatatacacattacaaGTGTTTGTAAAGTGGCATCGGCATACACATTGCTCTCGAGTCTGAAGtaggaacaaaactaacaaaGCTTGGAAAACAAGGCTGTGTAAGACCAGACATCTTTTAGCATCAAGCCACATTAAAACCCCACCATTCCTCCTTCACATGTACACTGTGTGGCTGTCAATTACCAAATCATTTGCATGGTTATATTTACAAACTTTTATCAGATTTCAGACATTCAAAGCTGCATGGTCTTATGAATTCGAGAACAGCTTGGAGTTCTGTTTGCTAAAAACCTAACTATACTCTTACAGCAGGGTAATATCTCAGAGCATGTTTTTctgaatatgcattttaattgagtaattttaaattgaaattaaatagttAGTGCAAATGTGTTCAGGGTTACCAAAGGGGTAAAATTTGGGCTTAAAATcgtttttggtttttaaagtCCTCTCCCACAAGTTTCCCTTGCCCCATCTGTAAGTAGCGTCGATTTGATCTATTTTCACGTTTTAATAACCACTCGTTGGCTCTCAGTTCCCCTGCATGTCTTATACAACCTTGTTTACCCTCAAAACACAATGAAGATCTGGGGCGCCTCACCGAAAGCAAGCCGCCGCTTTATACATCAgttgctggtgttttttttattatcattattattattttttttatcattttattttgatctccgCCATAACACTGTCTGGACACTTTTTGCTGATCTAATGCTTTGTGGACACTGTGTAGAGAAAAAGATCAAAAGTCTGGTGAATGGCATAGGAGGCAGCCACTGACCGCACTTTAAAAAGTCCAAGCAAGAGCCACATGACTGAAAGCCCAGCTCAGTCCTGGCCGGCCCGGGTCTTAGAGCATGTCGTGGCCACGGGGCTCGACTGTCCTGTGTCGGTCAGTGTCCGATGCTGCTCTGTCAGTGTGCCGAGAGCTCCCCCCATAGTGCGGTCTTAGCGTAACAATCAAGACACACTTCTCAGCTGCCACTCGCGCTGGGAAACTGAAGAAGGGGTGTAGGCAGGAGGGGGCTGAAACTGGTTGGCGATGTCGTAGTCGGCGGGGTAGGTCTCGCTGCTCTCCTCCATCTCGGACAGCAGCTCCAGggcctgctcctcctcctcagtgGGGTAGTGGCGCAGTAGATTAGCGGCTGTGGCCAGGATGGAGGCCCCCCCGGCCCCCGCCACCAGGTAGAAGCTGACGGCAAAGGTGACGTAGATGAGCGAGCCGTGGTACTTcttgtgctgctgctggagggACAGGATGAGCTCCGAGGCCCAGTAGCAGAACCCGATCACGGTGgcacactgcagcactgtgggTGGGTGGGCGTATATAAGTTAGCTATAAGTGCATGATCAAAA

Function

symbol description
tmem127 Predicted to be involved in regulation of TOR signaling. Predicted to act upstream of or within negative regulation of TOR signaling and negative regulation of cell population proliferation. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Human ortholog(s) of this gene implicated in pheochromocytoma. Orthologous to human TMEM127 (transmembrane protein 127).

NR:

description
transmembrane protein 127

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82960 True 2647 lncRNA 0.43 2 35813743 35817779

Neighbor

gene id symbol gene type direction distance location
AMCG00020875 NA coding upstream 76754 35727752 ~ 35736989 (+)
AMCG00020872 NA coding upstream 396898 35416052 ~ 35416845 (+)
AMCG00020869 NA coding upstream 400948 35405143 ~ 35412795 (+)
AMCG00020868 NA coding upstream 412219 35376270 ~ 35401524 (+)
AMCG00020863 LOC102779543,LOC108260282,LOC102217523,LOC106917416,LOC103149690,LOC106950839,LOC103473804,LOC101061943 coding upstream 457227 35354706 ~ 35356516 (+)
AMCG00020883 LOC106579887,LOC106585549 coding downstream 2377 35820156 ~ 35827073 (+)
AMCG00020884 NA coding downstream 33860 35851639 ~ 35859695 (+)
AMCG00020891 NA coding downstream 91573 35909352 ~ 35926494 (+)
AMCG00020893 tmed4,LOC107093818,LOC106566412,LOC101466713,LOC102209141 coding downstream 112843 35930622 ~ 35937150 (+)
AMCG00020892 ddx56,LOC107751685 coding downstream 119663 35937442 ~ 35950175 (+)
G66325 NA non-coding upstream 45172 35768241 ~ 35768571 (+)
G66319 NA non-coding upstream 52711 35758108 ~ 35761032 (+)
G66290 NA non-coding upstream 97494 35716045 ~ 35716249 (+)
G66258 NA non-coding upstream 260513 35552903 ~ 35553230 (+)
G66231 NA non-coding upstream 380185 35433268 ~ 35433558 (+)
G66395 NA non-coding downstream 186840 36004619 ~ 36074421 (+)
G66524 NA non-coding downstream 907115 36724894 ~ 36725129 (+)
G66528 NA non-coding downstream 988541 36806320 ~ 36806577 (+)
G66602 NA non-coding downstream 1255900 37073679 ~ 37074634 (+)
G66696 NA non-coding downstream 1470735 37288514 ~ 37288841 (+)
AMCG00020874 NA other upstream 63297 35747156 ~ 35750446 (+)
G66149 NA other upstream 648758 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 664325 35147603 ~ 35149418 (+)
G66060 NA other upstream 805421 34967844 ~ 35008322 (+)
G66008 NA other upstream 1026269 34784212 ~ 34787474 (+)
G66362 NA other downstream 49614 35867393 ~ 35908402 (+)
G66506 NA other downstream 436920 36254699 ~ 36256511 (+)
G66551 NA other downstream 1097036 36914815 ~ 36917436 (+)
AMCG00020942 NA other downstream 1749257 37567036 ~ 37575856 (+)
AMCG00020954 NA other downstream 2299283 38117062 ~ 38137073 (+)

Expression


Co-expression Network