G66535


Basic Information

Item Value
gene id G66535
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36851070 ~ 36851636 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83184
CCTCCCCGTAGAAGCACGACTCCGAGACGGGCGGGCAGCGGGCCGCCTCGCAGATCTCCGGACACGGCGTCTGTCTCTTCTTCAGTAGCCGCGGATGGACCATAGACACCAAAACCATAAACGCCATCCACTTCATCGCCATGGTACAGTATGTAGTCCGGTTTTGGTCAGATCAAATAAACTTGAAGCaactttttggtttgtttgcgtgaattataaatgctgttttatagattatttatttagaataaaaaagACCGCAACCGTTATTGGTTTAGGATACATTTTCATCCGCGTTTTGGTTTTTGTGCGCAATGGTGAAAGTGCACCCTCTCCAAACCAATTGAAACAAGTTTGCTACTTTCTATAAAAAGCGGTTATGTGAATGAAAGTATGCacctaaatatttgaataaagtgTAATATAGTAAATTAACCTTAAACAAGGGAAATCCTCATAATCATAGTCGTGCGCTTTCTGTTGCAAATGTGGTTTTGTATCATTTTTACGCAGCTGGAGGTTCAACTTCCAGCCTCTCTCCAAAACACTGACGGACCCTGCGCGCTT

Function

GO:

id name namespace
GO:0015629 actin cytoskeleton cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes

RNA

RNA id representative length rna type GC content exon number start site end site
TU83184 True 567 lncRNA 0.43 1 36851070 36851636

Neighbor

gene id symbol gene type direction distance location
AMCG00020913 LOC102294053 coding downstream 524241 36284882 ~ 36326829 (-)
AMCG00020912 NA coding downstream 594560 36246583 ~ 36256510 (-)
AMCG00020903 NA coding downstream 672809 36175349 ~ 36178261 (-)
AMCG00020905 LOC107756834,LOC107691567,LOC107548280 coding downstream 707977 36128362 ~ 36143093 (-)
AMCG00020906 star coding downstream 733376 36114629 ~ 36117694 (-)
AMCG00020915 NA coding upstream 20698 36872334 ~ 36874433 (-)
AMCG00020917 NA coding upstream 25839 36877475 ~ 36894127 (-)
AMCG00020918 NA coding upstream 57523 36909159 ~ 36913434 (-)
AMCG00020916 NA coding upstream 62851 36914487 ~ 36931628 (-)
AMCG00020924 NA coding upstream 122773 36974409 ~ 36998756 (-)
G66527 NA non-coding downstream 103327 36747515 ~ 36747743 (-)
G66499 NA non-coding downstream 614143 36235772 ~ 36236927 (-)
G66416 NA non-coding downstream 913812 35926538 ~ 35937258 (-)
G66327 NA non-coding downstream 1079384 35771484 ~ 35771686 (-)
G66284 NA non-coding downstream 1147997 35702763 ~ 35703073 (-)
G66536 NA non-coding upstream 17781 36869417 ~ 36870155 (-)
G66613 NA non-coding upstream 162345 37013981 ~ 37019796 (-)
G66685 NA non-coding upstream 416146 37267782 ~ 37268223 (-)
G66740 NA non-coding upstream 643487 37495123 ~ 37495370 (-)
G66786 NA non-coding upstream 885127 37736763 ~ 37739197 (-)
AMCG00020911 NA other downstream 568541 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 864358 35975764 ~ 35986712 (-)
AMCG00020887 tmem127 other downstream 1031240 35813873 ~ 35819830 (-)
AMCG00020876 NA other downstream 1154101 35694968 ~ 35696969 (-)
G66279 NA other downstream 1158610 35650980 ~ 35692460 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other upstream 168375 37020011 ~ 37045939 (-)
AMCG00020922 NA other upstream 209959 37061595 ~ 37067805 (-)
AMCG00020943 NA other upstream 780141 37631777 ~ 37632576 (-)
AMCG00020970 NA other upstream 2196068 39047704 ~ 39104867 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 3705494 40557130 ~ 40640339 (-)

Expression


Co-expression Network