G66602


Basic Information

Item Value
gene id G66602
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37073679 ~ 37074634 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83253
GTATTTTGGCAAGCACAATTTAGAGAAGTAACCAtgcatgtgaaaaatatatatgcaagaTCCACTTTGTTCCATTCCACAAAAGCTATTGTATGTCCAAACGACATCttgctaataataatgatgatgatgatgatgatgatgatgaataaaGTTATCCTTCCATTTAGAAGTCGATGTCCTTCTTGTTATGGGAAACATTAATCACCGTGTCAATGTTTGATTCGCCATTTTTAAGGTGTTTGATTACCTTTTTTTCTCTGACTTAAAACTCAGAGGGTAGGAAGTTACTAATTAAATGTGAGAaagttggttttgtttttcagccacCCTCCAAAACATACCTGTCCGGAACTTTATGCTTCTTGTTGTTGGTCATGCTGTTATCTGGGGGGCTGTGGTACTGCTTACACGGAACAAAAACTGCGCCGCTGCTATTTCCTTGGGGATCCGACACTTTCACACTCCCCGGGACTTCCCTGGCTGCTCTGCCGGGGTTCTGCGTTCTCCACCTCGGACTGGCGACCACTGATAGTCCCAGGCTTAGGCAGGCCTTGTGGCTTTTCAGTCTCAAAGCACGGCGATGCAGGATATCCAAGCTGTGCAGTTTCACAACATCAAGAACGATACGCCGgggttttacaaaaaacatgtaacttCAGTTACACGAACCACACCAACACGCCACAGTAAAAAACATGCCGTGGTAAACTACACTTGCTGAAAAGTGAAGGGTATAGTCCTTGAGTTGATATAGCGACAATAAAATAAGTACGAAATCATGTTGCCTTATGAACCTCCTCTGTACTGTGACACGTCGAAAGTAATTGTATCGGCTTAGAAGAAATGAAAAcgaaacatacaataaaaaaaaaaaacaaggcaGAAGGAATTCACCTCGTGTTGCCAACTCAGGCAGCAGAGCATCGTG

Function

NR:

description
PREDICTED: RNA polymerase II-associated protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83253 True 931 lncRNA 0.42 2 37073679 37074634

Neighbor

gene id symbol gene type direction distance location
AMCG00020919 NA coding upstream 15643 37047642 ~ 37058036 (+)
AMCG00020914 NA coding upstream 204101 36851495 ~ 36869578 (+)
AMCG00020909 mak16 coding upstream 832459 36234933 ~ 36241220 (+)
AMCG00020910 rnf122 coding upstream 847330 36205330 ~ 36226349 (+)
AMCG00020908 NA coding upstream 869819 36196447 ~ 36203860 (+)
AMCG00020925 NA coding downstream 19652 37094286 ~ 37112090 (+)
AMCG00020926 NA coding downstream 84018 37158652 ~ 37165302 (+)
AMCG00020930 LOC106580522,LOC104937675,LOC107673422 coding downstream 109030 37183664 ~ 37185928 (+)
AMCG00020931 loxl2,LOC106580522 coding downstream 129354 37203988 ~ 37226869 (+)
AMCG00020941 NA coding downstream 554690 37629324 ~ 37630094 (+)
G66528 NA non-coding upstream 267102 36806320 ~ 36806577 (+)
G66524 NA non-coding upstream 348550 36724894 ~ 36725129 (+)
G66395 NA non-coding upstream 999258 36004619 ~ 36074421 (+)
G66342 NA non-coding upstream 1216651 35798710 ~ 35857028 (+)
G66348 tmem127,LOC106585551,LOC107713035,LOC107699648 non-coding upstream 1255900 35813743 ~ 35817779 (+)
G66696 NA non-coding downstream 213880 37288514 ~ 37288841 (+)
G66700 NA non-coding downstream 226614 37301248 ~ 37301598 (+)
G66701 NA non-coding downstream 229415 37304049 ~ 37309335 (+)
G66739 NA non-coding downstream 420487 37495121 ~ 37495381 (+)
G66780 NA non-coding downstream 575795 37650429 ~ 37650698 (+)
G66551 NA other upstream 156243 36914815 ~ 36917436 (+)
G66506 NA other upstream 817168 36254699 ~ 36256511 (+)
G66362 NA other upstream 1165277 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 1323233 35747156 ~ 35750446 (+)
G66149 NA other upstream 1908694 35163813 ~ 35164985 (+)
AMCG00020942 NA other downstream 492402 37567036 ~ 37575856 (+)
AMCG00020954 NA other downstream 1042428 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 3246479 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 3481332 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 3976838 41051472 ~ 41062527 (+)

Expression


Co-expression Network