G66784


Basic Information

Item Value
gene id G66784
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37737732 ~ 37739188 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83471
ATGACAACAAAAAACTTCTAATTTTAAGAAGATGATAGTCCCGGGTCAGATttgaacagaaaacataaaattagATGTGCAGGAAGCAGAAACTAGATAAGAACTAAAGTGCAAACACCTCTTTATGTAATCAAGATTTTGTTACATCTATTTTAAAGAGGAGACTGTAAGGAAGGGGGAGTGGAGGGGTGCTATGGAAAAATACTCTTTTTAGGACATTTTAATCTCTTATCTCTGCTAGCCTGGATCAGATAACAATGGCTTAGTTTTGCCCAGTTATGGTATAGTGCAACTTTTATAGGCAAAGTAGTCAAACCCTgctattttctttcattttaactttGTGCACAATAATGCTTTTACTAACCAGTTTCACAGAATTGAAAAACCTGTAGCTATGCAGGATCACAGTTGGTGGCTCTAAGATGCCTCTACCTACCTCACACTTCACAACAGAATGCACACTTGCTTACAATAAACATAGGAGTCTTCATACAATGATTTACACCCTGCAGACCAACCTTCAACCTGAGAGTAAGGGCCCTGTACAGTTATACCATGGTCAATATGCACTGTGCCAGATTATCTGTTGATATCTCCAGGGTGTTGAGCAGAGACCAAAATACCACATCAGTGGAGCTCAAAAGCCTAATCTCCTGAGACTGGCATTGGAGTTCTAAGTGACCTCTTCCATAATGCAGATTGTAGGTTCAtactattattttgtttaagaaatgcCAGTATCCAAAGTAACTTACATAGTTTAACAAATATCAACATGCCTATACACAACATCACAAGGGAAGCAATATTactatacatacaaacaaaggTATAATGAGAAGGTGAGAATGGTCTACAGGTGTAAATAATCTATATATTTCtactaatatttattaatttgaaccAATAATACAATAAGACTTTTATTGTTAGGGAATTAATGCCAATCATTTGATCTCCCATTGCTTTTAATCTTTATGGTtcagagaaaattaaacaaaacagaacaaatagaTCAGATGGCTTAGTTTCTCAAACTGTACAGTCTGTATCATAAGAGATCTACAGAACAGAGTGTATGCACACAATCTACTTCATCATAACCCACCAAGACAGTGCTTTATGAAACAGTGAAAAAGTCACGGGTAGGCTCCTATTTAACCTAATGGTATTCTTCAAataatggaagaaaaaataggggaaagaaaacaatcacttGTCATAAAGCAGCTTGCAGATTTCAGGGACTGGACAGTGGTTCTTTGTGTTTCTCGTGAGTGGTGGGTTGAGctgtatttcagagaaaagCACAGTGCTGTTACAGGCTGCCTGGCCCATGGGAAGAGCTGTGTAAGCCAAGCTGAACTTGTTTCTGTACTATATTCACACATATAGTACGCCCCTCACTTTCCCTTTGTAACCATTTGCTTTATATAAAAAGACTGTAAAAGTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83471 True 1457 lncRNA 0.37 1 37737732 37739188

Neighbor

gene id symbol gene type direction distance location
AMCG00020944 antxr1a,antxrl,LOC107553121,LOC107661337,LOC107562635,LOC106585598 coding upstream 20652 37712999 ~ 37717080 (+)
AMCG00020945 antxr1,LOC108236442,LOC103362313 coding upstream 52236 37669962 ~ 37685496 (+)
AMCG00020941 NA coding upstream 107638 37629324 ~ 37630094 (+)
AMCG00020931 loxl2,LOC106580522 coding upstream 510863 37203988 ~ 37226869 (+)
AMCG00020930 LOC106580522,LOC104937675,LOC107673422 coding upstream 551804 37183664 ~ 37185928 (+)
AMCG00020946 anxa4,LOC107583400,LOC107758674,LOC107689041,LOC107558128 coding downstream 167083 37906271 ~ 37922454 (+)
AMCG00020951 NA coding downstream 291540 38030728 ~ 38031966 (+)
AMCG00020950 NA coding downstream 366824 38106012 ~ 38111899 (+)
AMCG00020955 LOC108426712,LOC103357663,LOC100712487,LOC106536361 coding downstream 487058 38226246 ~ 38228104 (+)
AMCG00020956 NA coding downstream 520330 38259518 ~ 38275155 (+)
G66780 NA non-coding upstream 87034 37650429 ~ 37650698 (+)
G66739 NA non-coding upstream 242351 37495121 ~ 37495381 (+)
G66701 NA non-coding upstream 428397 37304049 ~ 37309335 (+)
G66700 NA non-coding upstream 436134 37301248 ~ 37301598 (+)
G66696 NA non-coding upstream 448891 37288514 ~ 37288841 (+)
G66801 NA non-coding downstream 97914 37837102 ~ 37862332 (+)
G66826 NA non-coding downstream 235615 37974803 ~ 38065665 (+)
G66861 NA non-coding downstream 501502 38240690 ~ 38244475 (+)
G66865 NA non-coding downstream 536802 38275990 ~ 38276294 (+)
G66887 NA non-coding downstream 685524 38424712 ~ 38425252 (+)
AMCG00020942 NA other upstream 161876 37567036 ~ 37575856 (+)
G66551 NA other upstream 820296 36914815 ~ 36917436 (+)
G66506 NA other upstream 1481221 36254699 ~ 36256511 (+)
G66362 NA other upstream 1829330 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 1987286 35747156 ~ 35750446 (+)
AMCG00020954 NA other downstream 377874 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 2581925 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 2816778 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 3312284 41051472 ~ 41062527 (+)
G67323 NA other downstream 3859035 41598223 ~ 41602113 (+)

Expression


Co-expression Network