G66786


Basic Information

Item Value
gene id G66786
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37736763 ~ 37739197 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83474
GTCCAAGGTTTACTTTTACAGTCTTTTTATATAAAGCAAATGGTTACAAAGGGAAAGTGAGGGGCGTACTATATGTGTGAATATAGTACAGAAACAAGTTCAGCTTGGCTTACACAGCTCTTCCCATGGGCCAGGCAGCCTGTAACAGCACTGTGcttttctctgaaatacagCTCAACCCACCACTCACGAGAAACACAAAGAACCACTGTCCAGTCCCTGAAATCTGCAAGCTGCTTTATGACaagtgattgttttctttcccctattttttcttccattatTTGAAGAATACCATTAGGTTAAATAGGAGCCTACCCGTGACTTTTTCACTGTTTCATAAAGCACTGTCTTGGTGGGTTATGATGAAGTAGATTGTGTGCATACACTCTGTTCTGTAGATCTCTTATGATACAGACTGTACAGTTTGAGAAACTAAGCCATCTGAtctatttgttctgttttgtttaattttctctgaACCATAAAGATTAAAAGCAATGGGAGATCAAATGATTGGCATTAATTCCCTAACAATAAAAGTCTTATTGTATTATTggttcaaattaataaatattagtaGAAATATATAGATTATTTACACCTGTAGACCATTCTCACCTTCTCATTATAcctttgtttgtatgtatagtAATATTGCTTCCCTTGTGATGTTGTGTATAGGCATGTTGATATTTGTTAAACTATGTAAGTTACTTTGGATACTGgcatttcttaaacaaaataatagtaTGAACCTACAATCTGCATTATGGAAGAGGTCACTTAGAACTCCAATGCCAGTCTCAGGAGATTAGGCTTTTGAGCTCCACTGATGTGGTATTTTGGTCTCTGCTCAACACCCTGGAGATATCAACAGATAATCTGGCACAGTGCATATTGACCATGGTATAACTGTACAGGGCCCTTACTCTCAGGTTGAAGGTTGGTCTGCAGGGTGTAAATCATTGTATGAAGACTCCTATGTTTATTGTAAGCAAGTGTGCATTCTGTTGTGAAGTGTGAGGTAGGTAGAGGCATCTTAGAGCCACCAACTGTGATCCTGCATAGCTACAGGTTTTTCAATTCTGTGAAACTGGTTAGTAAAAGCATTATTGTGCACaaagttaaaatgaaagaaaatagcAGGGTTTGACTACTTTGCCTATAAAAGTTGCACTATACCATAACTGGGCAAAACTAAGCCATTGTTATCTGATCCAGGCTAGCAGAGATAAGAGATTAAAATGTCCTAAAAAGAGTATTTTTCCATAGCACCCCTCCACTCCCCCTTCCTTACAGTCTCCTCTTTAAAATAGATGTAACAAAATCTTGATTACATAAAGAGGTGTTTGCACTTTAGTTCTTATCTAGTTTCTGCTTCCTGCACATctaattttatgttttctgttcaaATCTGACCCGGGACTATCATCTTCTTAAAATTAGAAGTTTTTTGTTGTCATGTTATACCTGCTGACTATTGGTAAAGCATTATGAGTTTTCATATAAAAGAGGATTAGAAAGCTGCATTTGGTTGAATAATCACTTGTATAGCAAGAACAAAACACCACTTACTACTGAATATACATGAACTtagaaatcatttaaataaagtaagtcattataatgtatgtgttaCATGGActgtctgttttatattttgtgggGCACATGCAAGAAGAACAtctgatttatttctgtgtgatCCTTcttagaaatatgtattatttattattggatCTATTTGTTGTAAACCTGCATTGTTCCACACATAGATCACACATTTTATGAACTCCAATGCATATGTGTCCCCATTGATAATGCTGCTTTAGTCATTGGTTTTCTATCCCTAAAAGTTGCAGAAATGTTCAATTTTCTTTGAAATCGGGGTGAAAATCCTGTTTTCACACCAGGTTAGGACAGGGTCAGACAAATTGAGGGCACATTATAAGATGGTGCTAGAGCGAGAGGGATTTCTCTCTTTGTAGGGATTGTAGGCTGTGTAAACCAAGCTTTCGTCACCATCTCCCAGAcagctgtactgtacatttctatcttgttttttgaaatcaTGACATGAGAAAGTGATGAAAAACAATCACAAGGACAACAAAAAGACATGTGTTATTAAACAAGCACAGCttgatacaataataaaatgccaTGAGATACCACTGGCTTTACAATAAGTTATGACACTTAAgacaatgaaaatgacaaaccCCTTCCATATTGAACCCAACAGACTGGAATGCTTTCCATTAAACACCTGGTAAGCGagcagtaaaatatatacaactatGAACCCAACATATTGGATCATACCAACACCTGACTATTATTATGTTTCTGTAATTGATGAGTTAACATGGGGTGCTTCCAAACACATAGttatttgaaacacaaaataacagaatacTGCCACGGCTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83474 True 2435 lncRNA 0.36 1 37736763 37739197

Neighbor

gene id symbol gene type direction distance location
AMCG00020940 NA coding downstream 170643 37556580 ~ 37566120 (-)
AMCG00020938 acty,actr1,LOC106585571,LOC105889177,LOC108425179 coding downstream 186858 37545624 ~ 37549905 (-)
AMCG00020939 kctd9,LOC101468158,LOC102794741 coding downstream 197364 37534755 ~ 37539399 (-)
AMCG00020937 NA coding downstream 208995 37524705 ~ 37527768 (-)
AMCG00020936 LOC106579865,LOC105014025 coding downstream 281895 37398299 ~ 37454868 (-)
AMCG00020948 gfpt1,LOC103362312,LOC108426669,LOC102792631 coding upstream 32954 37772151 ~ 37814897 (-)
AMCG00020947 nfu1,LOC101072203,LOC107752565 coding upstream 76697 37815894 ~ 37821863 (-)
AMCG00020949 LOC103357666 coding upstream 103703 37842900 ~ 37892340 (-)
AMCG00020953 NA coding upstream 228975 37968172 ~ 38030972 (-)
AMCG00020952 NA coding upstream 355905 38095102 ~ 38095590 (-)
G66740 NA non-coding downstream 241393 37495123 ~ 37495370 (-)
G66685 NA non-coding downstream 468540 37267782 ~ 37268223 (-)
G66613 NA non-coding downstream 716967 37013981 ~ 37019796 (-)
G66536 NA non-coding downstream 866608 36869417 ~ 36870155 (-)
G66535 NA non-coding downstream 885127 36851070 ~ 36851636 (-)
G66817 NA non-coding upstream 160270 37899467 ~ 37899878 (-)
G66851 NA non-coding upstream 441840 38181037 ~ 38181274 (-)
G66872 NA non-coding upstream 538797 38277994 ~ 38278539 (-)
G66920 NA non-coding upstream 955795 38694992 ~ 38697487 (-)
G66926 NA non-coding upstream 968075 38707272 ~ 38732240 (-)
AMCG00020943 NA other downstream 104187 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 668958 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 690824 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 1454234 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 1750051 35975764 ~ 35986712 (-)
AMCG00020970 NA other upstream 1308507 39047704 ~ 39104867 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 2817933 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 3856883 41596080 ~ 41602270 (-)

Expression


Co-expression Network