G66801


Basic Information

Item Value
gene id G66801
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37837102 ~ 37862332 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83489
CGTCGGCTGCATCAATTGtttatgatttgtttgcatTCACAATATGGAGTTCACTGTGACATTAAggaattgttctttttttcGGGGGTGGTATCCATAAGACTCAAGCTACAGTTCAACACAAGGACCCACTCTGTTTATCTTTCAGCTGAGTAACAATGCAAGTTCAGAGGAAACTGTCTTTATAGTGATCCATCATCCGTGATTTCATAGAATCACCATTAAAAACAGCTTCATCTTTGTGTGGTGGAGTATGCCTTTATGCTGAAACGTACACCTAGGCCttgaaaataaaccattttaggATCCATTGCCATTACCAGAACAGCCATAGCAAAACCAGGATTGGTTAGAAGATCTGTGGAAAATTCCTATTTTGTAGGAAGTTTGCTAATGCCTAGTCTTAGCTTAAATCAACAGGAAACTAAATTGATCAAGGagtctattttaaatgaacaaaatgaattGCCACAAAACTGTTTCAGTTCAGACTTTAGAGGAAAAATTACTAGAATGTTACATTCATTATCATAATGTGCCTATTTGTAACGTTGTTGGCTAAATGAGAATTActgcaatatttttatatatatcaggTATTGcacaatgcatttcttttcagtttctgaACGAAACCAaggaaatacaatatacagcaaTGCTCTCCCATACAATGGAGTAGTTTCCCTATAAACATATCTTGCATTATTACAGTTGGTTCACTATGGCTtaagtattatgtttttttccttcactgatTCTAGTTGGTATTCCCAGATGAAAGCTAGACAGAAGTGGGAACAATGCGAGACGAGacaaagggggggaaaaaaggcatGAAAAACGTCAGCATTACATCACTTGACAAAACCACTATAGCCTGGTCTCGCTTTGCtgcatacagtgaggaaaataacaaaatctgcTGCAAAATTTGTTTgttcccaaacacacacacacacacacacagaaagcgAGAAATAAGAGACAAAAGACACTTGGAACAGGATAGAAGGGACACCATCTTCACACTCTTGAGAACAGCTTTGTAAAGAagacacagaaataaagaattCTTCTTAAAACTATAATATATCATCGTAATCATAAgaataatatatgtttatatattgatacTCACTTCATACATTCATTCTATAGCACTATCtatattcacatttattctTAACCGTGATATTTGAAATatcttttaaacactttttatgTACTGTACTTATACtattattcagaaaataaagggaaaaaaggaggacatttttttttcctaacatTGGCGTTATACACCAGGGTGTGTGATGAAGGGGTGCAAAGTTCATGATCCAGTTTGGTTTTTGCGGGTTTAACAATATACACCATTGTGAAGAACAGAGAACACAAAGTGAGGAGTAGGGTAGCAAAATGACCTGGAGGGATGATGCCATGGAGAGAAAATGGCCAATGCAGGGGAGTAATGAATGACAGCAGTGTAGGCCTGAAAAAAAACTGGGAGGGAATGTTCACTGTGGGGGCAAAAACAGACATCCCCCCTACCCTCcatattcataaatacattaaaatctgCCTCCATGTGAAAAGCAAGTTTCTCCTTTCCAATGGTGGAATCCATTATTGGTCCAAAGCTCGATGAAGTACATTAGCCAGAGCTCCATCCACACTAAGGTGGGGTATGAATGCATCCTCGATACTTGTCCAAAGTGTCCCTGGTCAGTTACCCCTTATACACACCCCACTTCAAAAGCCTCCTCAGCCTCCACTGCCAAGCATAGaaaatctgcatttcatttcGTCAGGGCTGTGCCCAAATAAGTCTCAGAGACACAGGTATGCTGTGCCCAAGACCCCCCAACCTCCACCTTACATGCATAAAAAAAAGGCTATGACCTGCATTagaaaccaataaaaaaaaaaaaaaaaaattcagaattACTTGAATGGCTTGATACAATCATGCCTCAAACTACATTCCCCTGCACCAGAGTAATTGAGTTTTCATTGTATAATCTTATggatattaattattatgattttggTCTTGTCTGTACAGACTATGTCTAGAACAGCAGTTCCCAAACATGGTCACACTGCGACCCAGCTATTTGTGATATTAAAGTATTGCAGTATCCGCCACAATATGAACTATACagccaacatacattttattgcatttaaaacatacacatgcGTTCATACAAAgggaacaaaataaaccattgtagcactttgaattattttcttacaattttgatagattttttttaatgtggattTGAGAGGAATGCGATAGGTTGTAGGACAAAAACTGCTGTGGACTGGCATCCAATCCAGTAGACTGGTGTTTGGGAACCAGTGCTCTAGAAGATGTGTTGACAAATATGCAGATTTATCATTGTTTCCAGATGGTGTAGGTCACAGagcaagaaaatataaatgggGGGGTGGAATCAAAATCATACAAGGAAAACAAGCTACTCCACTTCTAGGCAGTGTGGATGGATGCAAACTGCTCTGTGTGTATGAAAGCTTTCATGAATCTGAGAGAAGAGGagaatattttcttaaatcaagCATAATCCTTTGTGAATCCTAGAAAATGTAGCATTTAAAACCTGAAACCATACGTAATGACAGACTGATCGTCGACACCAAAGACACCTCCAGTAAAGTGCACACAGTCGGGAAACCACTTGCCCAATTCTGATTCACCTCCCTAAATACACAATGACacatgtgttttgcttttttccataCGTGTTCTACAGCAGTCACCTCTTTCCTGGACAGCATTATAAGCCTATGCAcactaaacaaataactaaaaaagCCAACAAAATCATAGTGGCAAAGACAATAGTAgtgaaagaacaaacaaacattatacCCAGTTTAGTAACAGGAGTAACGTGTACATGTACCGTAGTATACGTATACAAGAGTTCCATGCAAGAATCTTTTGTGGAATGGTAAGATGACATTGGAATGACGAAGAGCACTGTGGGTTTCGAAGGTAATGGCTGAGTGGGGAATATGGGTAATGTAGGCAATGGTTGAGCAGGGAATTATAGGGATTGTAGTACTGGGGTGATCATTGTTGGGGTTCTGGTTATGTACAAACACGGGAGGTTTCAATTAAGACAGTTGCAATCAAACACCCAAGGGAGCATTATTTTACAGAAGTATATTACACGCAGTGGAAGCCAGCTCTGCTAGCGGTAATGGGGGCTTTTTACGGTGCAACAGGGAGCATAAGAGATGTGCGATATACCTGGAGCAGTGAAAGACTATTTGGGGGTCTATGTACAGGTAATACCTTTGGCAAACTAAGTGCGGGTAACTAGGGATGCCAAGAACAAGTCTGTTGGTGCTAAAAGATCTTCCCAAAATCTCTTAATGCCATGCTTCCAGGAACTGTTTCTGGACagcagaatgtgtgtgtgtattgaaggAAAGGGGGGGGCTGTGGGGTTGTTGGTGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83489 True 3495 lncRNA 0.39 2 37837102 37862332

Neighbor

gene id symbol gene type direction distance location
AMCG00020944 antxr1a,antxrl,LOC107553121,LOC107661337,LOC107562635,LOC106585598 coding upstream 120022 37712999 ~ 37717080 (+)
AMCG00020945 antxr1,LOC108236442,LOC103362313 coding upstream 151606 37669962 ~ 37685496 (+)
AMCG00020941 NA coding upstream 207008 37629324 ~ 37630094 (+)
AMCG00020931 loxl2,LOC106580522 coding upstream 610233 37203988 ~ 37226869 (+)
AMCG00020930 LOC106580522,LOC104937675,LOC107673422 coding upstream 651174 37183664 ~ 37185928 (+)
AMCG00020946 anxa4,LOC107583400,LOC107758674,LOC107689041,LOC107558128 coding downstream 43939 37906271 ~ 37922454 (+)
AMCG00020951 NA coding downstream 168396 38030728 ~ 38031966 (+)
AMCG00020950 NA coding downstream 243680 38106012 ~ 38111899 (+)
AMCG00020955 LOC108426712,LOC103357663,LOC100712487,LOC106536361 coding downstream 363914 38226246 ~ 38228104 (+)
AMCG00020956 NA coding downstream 397186 38259518 ~ 38275155 (+)
G66784 NA non-coding upstream 97914 37737732 ~ 37739188 (+)
G66780 NA non-coding upstream 186404 37650429 ~ 37650698 (+)
G66739 NA non-coding upstream 341721 37495121 ~ 37495381 (+)
G66701 NA non-coding upstream 527767 37304049 ~ 37309335 (+)
G66700 NA non-coding upstream 535504 37301248 ~ 37301598 (+)
G66826 NA non-coding downstream 112471 37974803 ~ 38065665 (+)
G66861 NA non-coding downstream 378358 38240690 ~ 38244475 (+)
G66865 NA non-coding downstream 413658 38275990 ~ 38276294 (+)
G66887 NA non-coding downstream 562380 38424712 ~ 38425252 (+)
G66970 NA non-coding downstream 1148247 39010579 ~ 39010849 (+)
AMCG00020942 NA other upstream 261246 37567036 ~ 37575856 (+)
G66551 NA other upstream 919666 36914815 ~ 36917436 (+)
G66506 NA other upstream 1580591 36254699 ~ 36256511 (+)
G66362 NA other upstream 1928700 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 2086656 35747156 ~ 35750446 (+)
AMCG00020954 NA other downstream 254730 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 2458781 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 2693634 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 3189140 41051472 ~ 41062527 (+)
G67323 NA other downstream 3735891 41598223 ~ 41602113 (+)

Expression


Co-expression Network