G66826


Basic Information

Item Value
gene id G66826
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37974803 ~ 38065665 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83521
aaaaaaaaaaaaagaaaaaaaaaaaaaaattcccatGTCACTTACGCAcaactagtttttttttgttgttgtttgtttagttttgttttttaaaaaggtcttaagaatattttttccaatgAACTCTAAGTAATACAATTTATGTTAGATTTGCAGTTCTATATTCTGGAGcactttttcacattctgaagTTCAGTTCTGGAATACGTATAAGAATGCAAATATGTCTCAAATGAATAATTTCAAGCTTACTTTATAGCACGCATAGGATCAGGTCACTGACTAATGTCTGTTGGACTTACCACAGAAGTAAGCAGAACAGTAAATatgaagtgaaaaaatacatctttagcACAATTTGTCTAATTATAATGTGCAGTAGGctgcttgttgtttttatttgagattACAGATTTGCTTAATTTCACAACCATAGTTAGTGTCACTTATGTAACCTATCAGAGGATATGACAAATGTAAGTTTTTTGTTCTAAGTTGGATTTTAAAGAAAGGGGAGGACTTTGCATGAGAAATACCAACAGTCGGTGCCAATATTGTAATCCAGTTCATCTTGCAAGTAagacataatataaaatatttcatattatatgcaatatataagGTTAACAACATACATGTCAGGCAccttaaaattatgttttatgatcCAGCTGACCAGACCAGAAATGTGTGTTCAGGAAGGAACTTCCAATATTCAACATGTGTATGTCATCATTTCCAAGGCTATCGGCACCCAACATTAAATAGGATGCAACCCTGTGACCTCTAGCACAGATGAAACCATTCTCACTATATattggaaaaatatacattctggATAAAAAATACCAGTGACAACTAGAGACaagtgttattatttgtattattttgaagttGAAGGAAAATTTTAACAAAGGTTTTCTAATCTCTAATTTCACATTCCTACAATGGTTTCAGTAGTTTGAGAAAAAGCAAGTGCATACAtcaatatacataatttacaattgCCTTCCAGAACTGCACTTTTTAGAAAGTTAtcaaatcatattaaatcaTTTAGGAAGTCAGCAAAGGAACTGTGATATGATCTTGAAAGAGTAATACGAACCCTCCAAGCACACCTATAAAGAGGTGAAGATGTTCTGTTTTAAGAGCAATCCATAAcagttttaataatttgaaaaagtaaactagaacatacaaaattaaatctagTAAGCTGATAACTAAAGTATTATATCAAGTGTTTCTTGGAAAAGTGGCCATCAGACCTTTTTGTACCACCTTGACTGCTATGTCTAACCTCAGGTGACAAATGTAGCAGCTGTACCGCACTCTGACACcccaatgtttttttcctctttgttgACTTGTTTAATGCTATTGTGCCTAACTTATTTCAGTAATGTTAAGGTTTTTTGTATTAGTGTTGGTATTATCGTATGTTGTTGTGTCAAAATgtgatatgtttatttttctacaaaTGTTAGGTGAACAGTAGGGAGGGTGATGCAGTATTTACGGAGAGCTgtatgatggaaaaaaaaaacaatcccaataATATAATCTAGCCTGTATTAAAGACCCCCAGGTAACTAAAAACAATAGTGATGAGTATGATCTATTAAGTTACATTATTAATGTACTTGATAGGTTTATAAACCTATGCATCCTGGTTTCCATTCCTGTTCAAATCTCATATGCTGTTCTACACCTTTCCCCTGGAGGATGAGACATTGAAGGTCATCAAAGTACAGCTCAGTACAGCGGTGCCACTTCAAAAGTGACCCAAAAATTCCTGAAATCCTCTGTAAGTCTTTCCTGGATCCTTCTAAAGTAGAGGTTTCGTATTGTAAAGTTTATTCAAACAAAAGCcttctaaaaacaaatgaatctgACCTGCCAAGAAAGTGATGTGAACTGTTTGAGTATCTCACAGCCGTTGGGTCTGAGCAAGGTATTGGGGGTGGGGAAGAAgctgtgaaacaaaaaacaaacaaaaaaaactgcatttactCAAGGTTAAACAAGTAAGCAGTACAAATAAATAGTTAGGCTATATGAAACTAAcataaattaattgataaacTATTATTCTGAAGATAAGAGTTACTAAACTGTCAGattctaaacaaaaaacaaatctgtaaattgTCTTGTATAATGCAGCATAAAGATTGGCATTGCACCAAATACAATCAGTATGGGGGACTAAGAGATTTATGTAGCATAACCAATAGGAGTTTACCATAAGGAAACAAACAGTTCTTAAAACTGTGCAGAAATGGAAACCAAATTCATGGAAAGACAATTATCAGTACAAATGTGCACAAATGCCAAGCACTCCCCTGACAGCTCTGCATGGTTCGCAGCAGTTCCCAGTGCAACCCCTTTCCAAATTCTTAATTGACAACAGATTCTAACAAAGTCCAAGATCCCGCTTAAGCAATGTACATAGTGCTGTGTAAATGCCTCATCTTGtatataagtggaaaaaaagacaatctATTTAAGATGGAGTATataagaattataataaatattggaGAACCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83521 True 2555 lncRNA 0.33 2 37974803 38065665

Neighbor

gene id symbol gene type direction distance location
AMCG00020946 anxa4,LOC107583400,LOC107758674,LOC107689041,LOC107558128 coding upstream 52349 37906271 ~ 37922454 (+)
AMCG00020944 antxr1a,antxrl,LOC107553121,LOC107661337,LOC107562635,LOC106585598 coding upstream 257723 37712999 ~ 37717080 (+)
AMCG00020945 antxr1,LOC108236442,LOC103362313 coding upstream 289307 37669962 ~ 37685496 (+)
AMCG00020941 NA coding upstream 344709 37629324 ~ 37630094 (+)
AMCG00020931 loxl2,LOC106580522 coding upstream 747934 37203988 ~ 37226869 (+)
AMCG00020950 NA coding downstream 40347 38106012 ~ 38111899 (+)
AMCG00020955 LOC108426712,LOC103357663,LOC100712487,LOC106536361 coding downstream 160581 38226246 ~ 38228104 (+)
AMCG00020956 NA coding downstream 193853 38259518 ~ 38275155 (+)
AMCG00020962 rhobtb2,LOC106585588 coding downstream 426047 38491712 ~ 38516342 (+)
AMCG00020963 egr3,LOC106579855,LOC106585589 coding downstream 622498 38688163 ~ 38694505 (+)
G66801 NA non-coding upstream 112471 37837102 ~ 37862332 (+)
G66784 NA non-coding upstream 235615 37737732 ~ 37739188 (+)
G66780 NA non-coding upstream 324105 37650429 ~ 37650698 (+)
G66739 NA non-coding upstream 479422 37495121 ~ 37495381 (+)
G66701 NA non-coding upstream 665468 37304049 ~ 37309335 (+)
G66861 NA non-coding downstream 175025 38240690 ~ 38244475 (+)
G66865 NA non-coding downstream 210325 38275990 ~ 38276294 (+)
G66887 NA non-coding downstream 359047 38424712 ~ 38425252 (+)
G66970 NA non-coding downstream 944914 39010579 ~ 39010849 (+)
G66995 NA non-coding downstream 983756 39049421 ~ 39049631 (+)
AMCG00020942 NA other upstream 398947 37567036 ~ 37575856 (+)
G66551 NA other upstream 1057367 36914815 ~ 36917436 (+)
G66506 NA other upstream 1718292 36254699 ~ 36256511 (+)
G66362 NA other upstream 2066401 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 2224357 35747156 ~ 35750446 (+)
AMCG00020954 NA other downstream 51397 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 2255448 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 2490301 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 2985807 41051472 ~ 41062527 (+)
G67323 NA other downstream 3532558 41598223 ~ 41602113 (+)

Expression


Co-expression Network