G66920


Basic Information

Item Value
gene id G66920
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 38694992 ~ 38697487 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83634
ttttaaatattttttgttttatttttttatataaacaccCTCTCCATCTTCGTCtccatatttttgtatttacagtatttataataatcttcaaaataaagcattaaaaagaaaatggcataATTTGTGCTGTCTCAATGCTCCACACACCCTCAAACTCTGCAAAAGAGTGATAGATTAGCTGGTCCGATGGTAAAGCTCCCAGCAGGTGTAAGCCAGTGTAGTAAAAAGCTaatcacaggaaaaaaaaattgtacctTTTGCCAACTGAATTATAACACAACATTCTatactttatatttacaaatatttgcttTGTCTGAAAGAGGATATTTAGAAAATCctcaatatatacattcaatcactttatatatacatatataaatatatatatatatatatatatatatatatatacacacacagacacacacacacacatactattttaatactgaaaaaaaacaactgtgctCTTTACATTCTTGAGTATAAAAGCTGATGCTCCTGCTgtagtaatatatttaaaactatcTAAACGGAAAGACCAAAGCCTCAATTCCTTGCCTGAATCTCTGCACACCAATACTAAATTGATTTCATTATAGACCTCTGAGTGCTGAATGGTCTTTATTGACCAAGTTATCTGTTGGCAAGTATACTAGCTGATGGGTCCAAACCCAGgacattacaaaaaacagaaagggaAAGGGTTTACAATTTCTATccagaaacatttcaaaaacagtttCCAATACCCAAGGTTCTTTGCACTGTTCTTCCACTCTTGGGAAAAGTCTAGATCCTTAGctcatttaaatgaatagttCTCAGCAAAGCCTTTTTTTGGTaaaatatgtggaaaaaaataataataatagggttAAACAAAAATGGGTTTAGATGCAGtttaaacaatttcaaaaattACGGGGAATGTTTGAATTTCTATACCCAAACGATGACAAGAAAATGAAGAGGCCGTGCTGACACTATATCCCCACACCAGCCACAATCATGTAGCTCAGAAAGGTAATGACTCCTAAAGTGGGCAAAGTAAATCTGCTCCTACCAGCAGTCAAACCTCCCTCAGGCCACAGAGCAGCATGGTTTCAGACTACGTCTCACAGTTAGTTCAGTCAGTTCGTCTGCTGCGTTCATCCAGAATTGGGCAATCACCAAAGCAAACTACCTTGCAGTGGATGACACTTGAGCTTCTGTGTGTCAACAACAGAGTGCAATACTTGGAGACAAGTCTGTGTAGGTGAGGCAAAAAAcctcaacaacaaaaaaaaccctACTTCACAATGTACACACATTTGCTTATCAAATACCATCTGCTGAGACTAATtatcctgttgtttttgttgttttttctccccaaaGACTAGCAATCACCCCTGACAAATGTTACTAAATGTAATACTACTAGCATACAGTGGAACAAAGTTGGTGGAACAGTTACAGTATTTGACAAAGTGATAGCTCCTTGATACCATTTGAGCATCAACATGATTTATGAAAGGGGGCAGCCCCTGATAACTGATAACTGATGTCTTTTCTTAAAAGGAGTATCCCCtttattatctatctatctatctatgtagtGCTTTAATGTTATAGTCCACATTCGAATGAATATGGTAATTCATTTCCAAAATCACAATTAGTATGTCTGTAAATaagtttatattatattcaataatatgctaattatacaatatttaatgcatatatCGCAGGTTAAAGTAATCCAAATATGAccaatattgatttttttttttttttattataattttagtttggtctgttcacacacacacacacacacacacacacacacacacattaaattaGCTGATAGAAATAGCACTTCAGTATGAAGTGTGAATCTTCTGCTGTTACACAAACTTTATTCCAcgtacttttttgttttcattttgcatttaggaatattaatgaaggaaaaaaacatttatgtggAAGATAAATCATAAGGAAAGTAGTCAATGTTTAGCTTAAGGGTAAAGATATATGGTTCGGCCATATTGCAATCTTTAAAACACTAGACTCATAGCCCTGGGGTTTGCTTGAACCAGGGCACATTTTAGAGCAGAAAAAATTGGCTTTATAGTCACATTCTTTTTGGCACATTCTCGTATAGAAAAattcagctttttttcttttttcttcttcaaaaaaCACTCGGCAGCAGTATAAATAGTTAAGATAAGGAAACAAAGGCGCATCGAATAAGGTTATCATCGACAGTAAGCAAACAGTCTCTGTTATATTctgaacacatacaaaacaaacaaaaacagaacaaaaaaacaaaacaaaaacgtaaaCATCCAAGTGCCTGAAATACCAATGTAGCTCACCTTGTTTGAAAAGGTGGTATTTTGttaaatctgtatattttaGCCAAAATGGCGATCATCCTGATAGCCCTCCCCTTctccagatatatatatatatatatatatatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83634 True 2496 lncRNA 0.34 1 38694992 38697487

Neighbor

gene id symbol gene type direction distance location
AMCG00020960 NA coding downstream 236354 38427880 ~ 38458638 (-)
AMCG00020961 NA coding downstream 284130 38366127 ~ 38410862 (-)
AMCG00020959 NA coding downstream 394573 38278635 ~ 38300419 (-)
AMCG00020957 NA coding downstream 434991 38241746 ~ 38260001 (-)
AMCG00020958 NA coding downstream 455998 38232666 ~ 38238994 (-)
AMCG00020971 NA coding upstream 307943 39005430 ~ 39009794 (-)
AMCG00020974 NA coding upstream 397010 39094497 ~ 39096651 (-)
AMCG00020975 NA coding upstream 419948 39117435 ~ 39529985 (-)
AMCG00020977 NA coding upstream 949262 39646749 ~ 39666597 (-)
AMCG00020979 NA coding upstream 979430 39676917 ~ 39677327 (-)
G66872 NA non-coding downstream 416453 38277994 ~ 38278539 (-)
G66851 NA non-coding downstream 513718 38181037 ~ 38181274 (-)
G66817 NA non-coding downstream 795114 37899467 ~ 37899878 (-)
G66786 NA non-coding downstream 955795 37736763 ~ 37739197 (-)
G66740 NA non-coding downstream 1199622 37495123 ~ 37495370 (-)
G66926 NA non-coding upstream 9785 38707272 ~ 38732240 (-)
G66927 NA non-coding upstream 26804 38724291 ~ 38772808 (-)
G66994 NA non-coding upstream 339673 39037160 ~ 39038645 (-)
G67010 NA non-coding upstream 378223 39075710 ~ 39092196 (-)
G67025 NA non-coding upstream 601399 39298886 ~ 39299232 (-)
AMCG00020943 NA other downstream 1062416 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 1627187 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 1649053 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 2412463 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 2708280 35975764 ~ 35986712 (-)
AMCG00020970 NA other upstream 350217 39047704 ~ 39104867 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 1859643 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 2898593 41596080 ~ 41602270 (-)

Expression


Co-expression Network