G66927


Basic Information

Item Value
gene id G66927
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 38724291 ~ 38772808 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83641
tttgtactttttttttttaatatagatatatatacattaaaatccaTAACCCCCTCCATTACATACAGGTTTACAAAGGCAGATACCGTGGCTGAAAAACACAACCTGGGGGGAAAAACAAGGAGGACgaaaaaaaacatctagaaaaacacaaaataaaacaaataaatataaatgtatataaaaacaggaaagacatttaaataggCAACTGCTTTTCACTTGCTTCAGCTTTTCATCCGTAACGTTTGTCAAGTTCATACATGGCTTCTGAGGAGAACATTAAAACAACGAACCACTACTGCACTTTTACATTAATCCATCGGgtttagattttacatttttgtgcacagattaataataaaaactatacGTATAAGTCACAATCttggttttgcttttgaatACTAGAAACAAAACTGCATGGAACTAATGGCTTAGTGAATATGGCAAATCATCCTGAAAAGGCTGCTTAGTGTCTTGTATATCAGGGAGAATAAGGGAAATCCAGGACACACTGCAGCGCAATCAAGCCCAGTCCACAATCTAGCATGTTTTATAGGTTTCTTCAACCCTGAGTAGACCTGGGAAAGGGATTAAACTGGTGCAGTTAAAGGAGTAATTcattcaattaactaattaagagttAATGCAGCTTGAAAACTAGAAAGTATTTGGCCCTTTGAGGACTGGATTGGTAGAATCCTGCTGTAgagtacttaaaataaaataaaataaaatcataagaGACTAGGAGAGATTCGAGTTCATACAATCTTCTACCAGTGCAATGTCAAAGAAGGAGAAGGGGCACAGTTTAGTGTTGGCGTCTGTTTGGACTGCGTGACTGGGCTGCGCCCCCCCCCGGCCGTCTCCGCGGTCAGTCGTCCGCCACGATGGACAGGGCGCGCAGCTCGTTCAGCTTGGCTTCATTTTCACGCTCTCTCTGCTCGTCCGTCTGTCCCGGCGTGTCGATCTGCTCCGTCAGCTCGTCGAAGATCTTGTACATTTCGGTGAAGTACACCACCTGCAACACAGACACCGAGAACTGAGTGTGGG
>TU83642
tttgtactttttttttttaatatagatatatatacattaaaatccaTAACCCCCTCCATTACATACAGGTTTACAAAGGCAGATACCGTGGCTGAAAAACACAACCTGGGGGGAAAAACAAGGAGGACgaaaaaaaacatctagaaaaacacaaaataaaacaaataaatataaatgtatataaaaacaggaaagacatttaaataggCAACTGCTTTTCACTTGCTTCAGCTTTTCATCCGTAACGTTTGTCAAGTTCATACATGGCTTCTGAGGAGAACATTAAAACAACGAACCACTACTGCACTTTTACATTAATCCATCGGgtttagattttacatttttgtgcacagattaataataaaaactatacGTATAAGTCACAATCttggttttgcttttgaatACTAGAAACAAAACTGCATGGAACTAATGGCTTAGTGAATATGGCAAATCATCCTGAAAAGGCTGCTTAGTGTCTTGTATATCAGGGAGAATAAGGGAAATCCAGGACACACTGCAGCGCAATCAAGCCCAGTCCACAATCTAGCATGTTTTATAGGTTTCTTCAACCCTGAGTAGACCTGGGAAAGGGATTAAACTGGTGCAGTTAAAGGAGTAATTcattcaattaactaattaagagttAATGCAGCTTGAAAACTAGAAAGTATTTGGCCCTTTGAGGACTGGATTGGTAGAATCCTGCTGTAgagtacttaaaataaaataaaataaaatcataagaGACTAGGAGAGATTCGAGTTCATACAATCTTCTACCAGTGCAATGTCAAAGAAGGAGAAGGGGCACAGTTTAGTGTTGGCGTCTGTTTGGACTGCGTGACTGGGCTGCGCCCCCCCCCGGCCGTCTCCGCGGTCAGTCGTCCGCCACGATGGACAGGGCGCGCAGCTCGTTCAGCTTGGCTTCATTTTCACGCTCTCTCTGCTCGTCCGTCTGTCCCGGCGTGTCGATCTGCTCCGTCAGCTCGTCGAAGATCTTGTACATTTCGGGTCCATCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83641 True 1059 lncRNA 0.41 2 38771620 38772808
TU83642 False 1023 lncRNA 0.40 3 38724291 38772808

Neighbor

gene id symbol gene type direction distance location
AMCG00020960 NA coding downstream 265653 38427880 ~ 38458638 (-)
AMCG00020961 NA coding downstream 313429 38366127 ~ 38410862 (-)
AMCG00020959 NA coding downstream 423872 38278635 ~ 38300419 (-)
AMCG00020957 NA coding downstream 464290 38241746 ~ 38260001 (-)
AMCG00020958 NA coding downstream 485297 38232666 ~ 38238994 (-)
AMCG00020971 NA coding upstream 232622 39005430 ~ 39009794 (-)
AMCG00020974 NA coding upstream 321689 39094497 ~ 39096651 (-)
AMCG00020975 NA coding upstream 344627 39117435 ~ 39529985 (-)
AMCG00020977 NA coding upstream 873941 39646749 ~ 39666597 (-)
AMCG00020979 NA coding upstream 904109 39676917 ~ 39677327 (-)
G66920 NA non-coding downstream 26804 38694992 ~ 38697487 (-)
G66872 NA non-coding downstream 445752 38277994 ~ 38278539 (-)
G66851 NA non-coding downstream 543017 38181037 ~ 38181274 (-)
G66817 NA non-coding downstream 824413 37899467 ~ 37899878 (-)
G66786 NA non-coding downstream 985094 37736763 ~ 37739197 (-)
G66994 NA non-coding upstream 264352 39037160 ~ 39038645 (-)
G67010 NA non-coding upstream 302902 39075710 ~ 39092196 (-)
G67025 NA non-coding upstream 526078 39298886 ~ 39299232 (-)
G67032 NA non-coding upstream 723027 39495835 ~ 39527599 (-)
G67056 LOC103376870 non-coding upstream 1052062 39824870 ~ 39929271 (-)
AMCG00020943 NA other downstream 1091715 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 1656486 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 1678352 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 2441762 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 2737579 35975764 ~ 35986712 (-)
AMCG00020970 NA other upstream 274896 39047704 ~ 39104867 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 1784322 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 2823272 41596080 ~ 41602270 (-)

Expression


Co-expression Network