G67056 (LOC103376870)


Basic Information

Item Value
gene id G67056
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 39824870 ~ 39929271 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83792
tggccactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttatgcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgcctaatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaatcattctttagaaatgttggcccatattgataggatagcatcttgcagttgatggagatttgtgggatgcacatccagggcacgaagctcccgttccaccacatcccaaagatgctctattgggttgagatctggtgactgtgggggccagtttagtacagtgaactcattgtcatgttcaagaaaccaatttgaaatgattcgacctttgtgacatggtgcattatcctgctggaagtagccatcagaggatgggtacatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggccgtggcatttaaatgatgcccaattggcactaaggggc

Function

NR:

description
RRP12-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83792 True 635 lncRNA 0.46 2 39824870 39929271

Neighbor

gene id symbol gene type direction distance location
AMCG00020980 gfra2,gfra2b,LOC105911104 coding downstream 86530 39735434 ~ 39738340 (-)
AMCG00020979 NA coding downstream 147543 39676917 ~ 39677327 (-)
AMCG00020977 NA coding downstream 158273 39646749 ~ 39666597 (-)
AMCG00020975 NA coding downstream 294885 39117435 ~ 39529985 (-)
AMCG00020974 NA coding downstream 728219 39094497 ~ 39096651 (-)
AMCG00020986 NA coding upstream 242159 40171430 ~ 40192036 (-)
AMCG00020985 NA coding upstream 282272 40211543 ~ 40227671 (-)
AMCG00020984 pbdc1,LOC106568135 coding upstream 340370 40269641 ~ 40275638 (-)
AMCG00020991 NA coding upstream 525621 40454892 ~ 40458463 (-)
AMCG00020992 NA coding upstream 600887 40530158 ~ 40530610 (-)
G67032 NA non-coding downstream 297271 39495835 ~ 39527599 (-)
G67025 NA non-coding downstream 525638 39298886 ~ 39299232 (-)
G67010 NA non-coding downstream 732674 39075710 ~ 39092196 (-)
G66994 NA non-coding downstream 786225 39037160 ~ 39038645 (-)
G66927 NA non-coding downstream 1052062 38724291 ~ 38772808 (-)
G67080 NA non-coding upstream 277908 40207179 ~ 40207437 (-)
G67103 NA non-coding upstream 362247 40291518 ~ 40291726 (-)
G67181 NA non-coding upstream 641056 40570327 ~ 40571996 (-)
G67183 NA non-coding upstream 643750 40573021 ~ 40574856 (-)
G67246 NA non-coding upstream 911832 40841103 ~ 40904117 (-)
AMCG00020970 NA other downstream 720003 39047704 ~ 39104867 (-)
AMCG00020943 NA other downstream 2192294 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 2757065 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 2778931 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 3542341 36260993 ~ 36282529 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 627859 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 1666809 41596080 ~ 41602270 (-)

Expression


Co-expression Network