G67108 (LOC100846954)


Basic Information

Item Value
gene id G67108
gene name LOC100846954
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 40321113 ~ 40321821 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83857
caaggtccccctgctcaagaaagcacatgttcattggcaaacttcagacaggcctgtacatctgaatgattcagaggagaactgggtgaaagtggtctcagatgagaccaaaatcaagctctttggcatcaactcaactcgctgtgtttggaggaggagaaatGACCCCAAAAACACCATCcacaccgtcaaacatggaggtggaaacattatgctttgggggtgtttttctgctaaggggacaggacaactgcaccgcatcaaagggacgatggacggggccatgtaccgtcaaatcttgggtgagaacctccttccctcagccagggcattgaaaatgggtcgtggatgggtaatccagcatgacaatgacccaaaacacacagccaaggcaacaaagcagtggctcaagaagaagcacattaaggtcctggattGGCCTAGCCAGTGTCCAGACCTTAATCcaatagaaaatctgtggagaggagctgaaggttcgagttgccaaacgtcagcctcgaaaccgtaatgacttggagaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacatctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcgaaggggtcaaatactgatttccctcattaacatgcaaatcaatgta

Function

NR:

description
transposase-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83857 True 709 TUCP 0.48 1 40321113 40321821

Neighbor

gene id symbol gene type direction distance location
AMCG00020988 fgf17,LOC106585328,LOC106580010 coding upstream 1390 40311520 ~ 40319723 (+)
AMCG00020990 NA coding upstream 36617 40277322 ~ 40284496 (+)
AMCG00020982 xpo7,LOC107586117,LOC107678024 coding upstream 51823 40229942 ~ 40269290 (+)
AMCG00020983 NA coding upstream 91346 40211142 ~ 40229767 (+)
AMCG00020981 NA coding upstream 257428 39801279 ~ 40063685 (+)
AMCG00020989 NA coding downstream 47413 40369234 ~ 40386635 (+)
AMCG00020987 NA coding downstream 77115 40398936 ~ 40431760 (+)
AMCG00020994 NA coding downstream 115517 40437338 ~ 40456772 (+)
AMCG00020995 NA coding downstream 168865 40490686 ~ 40530054 (+)
AMCG00020996 NA coding downstream 222269 40544090 ~ 40554656 (+)
G67048 NA non-coding upstream 571752 39749157 ~ 39749361 (+)
G67027 NA non-coding upstream 1015526 39305297 ~ 39305587 (+)
G66995 NA non-coding upstream 1271482 39049421 ~ 39049631 (+)
G66970 NA non-coding upstream 1310264 39010579 ~ 39010849 (+)
G66887 NA non-coding upstream 1895861 38424712 ~ 38425252 (+)
G67180 NA non-coding downstream 248506 40570327 ~ 40571722 (+)
G67182 NA non-coding downstream 251733 40573554 ~ 40574856 (+)
G67207 NA non-coding downstream 463940 40785761 ~ 40791471 (+)
G67221 ppp3ccb,LOC107678020,LOC107553709,LOC107720725,LOC107586120,LOC107705087,LOC103046193 non-coding downstream 628278 40950099 ~ 40965912 (+)
G67272 NA non-coding downstream 717033 41038854 ~ 41039096 (+)
AMCG00020954 NA other upstream 2184040 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 2745257 37567036 ~ 37575856 (+)
G66551 NA other upstream 3403677 36914815 ~ 36917436 (+)
G66506 NA other upstream 4064602 36254699 ~ 36256511 (+)
G66362 NA other upstream 4412711 35867393 ~ 35908402 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 234145 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 729651 41051472 ~ 41062527 (+)
G67323 NA other downstream 1276402 41598223 ~ 41602113 (+)
G67459 NA other downstream 1731109 42052930 ~ 42053675 (+)
AMCG00021029 sfrp1,LOC104937559,LOC106585130,LOC105889956 other downstream 2101522 42423343 ~ 42465886 (+)

Expression


Co-expression Network