G67180


Basic Information

Item Value
gene id G67180
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 40570327 ~ 40571722 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83936
CCTTCCCATCACCTACAAGTGGGAGGATACTCTCAGCCTCCAAACCGCATTGTTCGTAAGCGTTGAAGCCTGAGAACAATTATGTGGCTCTGTTCAACTTCACAGAAGGAACAAAAAATcacaaaagttaattttaaaatccctGTACATGGTGACCACTAGATGTcactattgtgtttttaaatctgctttTCTTGCACTTGCAGTCTTCAGTTTTGGTCTTCCCGTTAAAGCTGTGTAAGATGTGAATTTTCAGTTAGTGTTTCAGGATAGGGTCTCAAAGGGAGGGGGAAGGACTAATACTGGGATTCCTAGAACAGCGGTGAGATATTTCTATTGGTTAATCAGCAGGAATTAATTGATTGACGGTGCAAAAGGAgagttaatgttttaatgtatagatGCCCTAATTGTGTTCACGCCTTTTGATTTGGAGAGTTGTCTTTTCCTTAATTTCCAAATTTGCCCTAAACTGATGATTCATTCAtcacaaaagtaaaagtaaaaataaaaatgagtttTGCCTATCCCCTTTCATCAGTCAGTGTGAACGTAGTAAACTGGATATGAGTAGTTTCATGCATCTTTGCATCtaatccaacatttttttttttttttggtaatgttatgaattttcattttacagcCATGAAAGGTGATGAATGATGAGGACGGCCCATATTAAGCACTTTCAAAAATGGCCCCATTTCCTAGCTCTCTTTCACATCTGTATTCACCTTAGCACTCCCCCAGCTGGTTAGCCTGCCAGTAAAGTGGTCACAGCAAGattatttgcattgcattgctaCAAGTGGTTTGCTGATATTTGAACAGATTCTCATTTGCATCGACAACACAGCCAAGAGGCTCAGCACGCTGCGGCAGATAAATCATTTACAacggtaataaaataaaatgacaataattatatatattccaacGATTGAAAAGCAGCACGTTTTCAGCTCAAGACAATTTGTTGCCAGCTGGCCCATCTAGTTATGTCCAGTTGTGATCAGGTTTGGAATGGGGTTTAAGCAAGTTCTGATTTGGGAACATGAGTCAAAAGCTAAAGCTAGTGtacaatttatttcactgtCTGCAGAACTTGCCTAATCAAGTTAAAACACCATGGGGTAAAATCCACATCTTCACATGACTACCTCTTTCCTTCACCTCTGAAGCAACGTCAGTTCCCACactgtgatatttatttatttatttatgcatttatacatgtatttatctgCAGAGTAAAACCTTGATACTGGGTTATAAAAAGGTTTGGGCATATGTAGTTGTAGTCAGAAGTTTTCACatacccttcatttgaaactgttgtgtgattcaataaatgtttatgatGCAATACTTATCGACCAGTTTTTTTCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83936 True 1396 lncRNA 0.38 1 40570327 40571722

Neighbor

gene id symbol gene type direction distance location
AMCG00020996 NA coding upstream 15671 40544090 ~ 40554656 (+)
AMCG00020995 NA coding upstream 40273 40490686 ~ 40530054 (+)
AMCG00020994 NA coding upstream 113555 40437338 ~ 40456772 (+)
AMCG00020987 NA coding upstream 138567 40398936 ~ 40431760 (+)
AMCG00020989 NA coding upstream 183692 40369234 ~ 40386635 (+)
AMCG00020999 NA coding downstream 186775 40758497 ~ 40799108 (+)
AMCG00021000 NA coding downstream 250847 40822569 ~ 40838773 (+)
AMCG00021002 NA coding downstream 338713 40910435 ~ 40913147 (+)
AMCG00021001 NA coding downstream 352725 40924447 ~ 40939566 (+)
AMCG00021007 NA coding downstream 519511 41091233 ~ 41115596 (+)
G67048 NA non-coding upstream 820966 39749157 ~ 39749361 (+)
G67027 NA non-coding upstream 1264740 39305297 ~ 39305587 (+)
G66995 NA non-coding upstream 1520696 39049421 ~ 39049631 (+)
G66970 NA non-coding upstream 1559478 39010579 ~ 39010849 (+)
G66887 NA non-coding upstream 2145075 38424712 ~ 38425252 (+)
G67182 NA non-coding downstream 1832 40573554 ~ 40574856 (+)
G67207 NA non-coding downstream 214039 40785761 ~ 40791471 (+)
G67221 ppp3ccb,LOC107678020,LOC107553709,LOC107720725,LOC107586120,LOC107705087,LOC103046193 non-coding downstream 378377 40950099 ~ 40965912 (+)
G67272 NA non-coding downstream 467132 41038854 ~ 41039096 (+)
G67309 LOC105030512,LOC106569888 non-coding downstream 732465 41304187 ~ 41305221 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other upstream 112 40555966 ~ 40570215 (+)
G67108 LOC100846954 other upstream 248506 40321113 ~ 40321821 (+)
AMCG00020954 NA other upstream 2433254 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 2994471 37567036 ~ 37575856 (+)
G66551 NA other upstream 3652891 36914815 ~ 36917436 (+)
AMCG00021005 LOC106580519 other downstream 479750 41051472 ~ 41062527 (+)
G67323 NA other downstream 1026501 41598223 ~ 41602113 (+)
G67459 NA other downstream 1481208 42052930 ~ 42053675 (+)
AMCG00021029 sfrp1,LOC104937559,LOC106585130,LOC105889956 other downstream 1851621 42423343 ~ 42465886 (+)

Expression


Co-expression Network