G67246


Basic Information

Item Value
gene id G67246
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 40841103 ~ 40904117 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84007
tgagggaaaaaaaaaaaaaaaaaaaaaaatttaaaaagacattttcCATTCCATACATTGAAATAGCACACAATTGCAAAGAGACaacacattgaaaaacaaacctgtaTGTACAAAGAACATTTctacatgtatattttgatttcatgaacaaatcaataaatattaaaagtacatCAGAGAGAAATTGCTAGAGAGTGCAGAGAGGCAGAAGGCAAATTGATTATTTTCCCTGTCAGTTATTGTCAACCAAAAATGGCCCCCTtccccagcacacacactgctgtcagTTGAGCTGACTTTGACAGATTTAGTAGATAGGGCAACAGTGTAAAGCCTTGGTCGTTTCACTGACCACCACCAGTCTAATTTGACTGCTCCAAAATCAGGTGAAAGGAGTCAACTGAAGACAAAGTAGGCCCTTGGGACTACATTTGGACAACCTAGCGTTAACTAGGGATAGGTCAACTCTCCTGTACATAATGTAGATTGTGTGCCTCGTTTCCGACACCAACCAACATTGGGACTTCTACTTTTGCTTTCATTGAACATTGCATACCATAGATCAGTTTTGTATACTTTGGATTCTATGATTCCTCCATCAAGGATGCTTATGCGTTTAATATTGCATGGAcaactccccctccccctccataCATAAAGAAACACTTAACATACAGCCAACCTCGGCACATGTcagatattcattttaatttctgttgctCACCTTGCAGACCTGAGTGGATTCCAGCAAAATATATGGGAATTAAAGCTTCtggacaaacaaacatgtaaaagaaaaaataagtccAATGCAAGACTGAGATATAGTTCTTCTGTATTATTTACTTAAACTAACAGATTCGGAGTTTCCTGGTAAGCTAAACAAAGACCAAGAACCACTTCAAGAGATCCAAGATAAGGTTTTTAAgcttatataaaatgcataaggGCAAGTTTATTAGATCTATATTAATCTATggcttaaacaaaataataataataataatatgtaaacaCAATGGGAAGTGCATAGGGAGCATAGTTTTAGTTCTGTAATCAGTCACCATTAGATGACAATGCCATTCCAACAAAGCTTATAGTATTAAGAACAATTTGAATgcacaattcaaaacaaacttcTGATACATGATAGATCAATGGCAGTCACATGATTTAGTAAAGGTTTGTTTactacaaacaaagaaaagtagGCAATTATTGCACAGACTCCCAGTTCAGTTCTATGCAATCACAactttgtaatgaaaaatgcTTCAGCTTTCGATGCAGAAGACACTACCAGGTCATATTGTTCTGTGAGAAATACAAGTTATTTGGAAAGGAACAAGGGGAATAATGAATGTACCAATGAAACCTACATAGATTTTTCCATATCTACACACATAAATCAGCATGTCCACCATAACTGTACGTAACtgcaacaaaaaactaaaatcagagAAACCAGCCTTCGTAGGCTAGCTAGACTTTCGCTCTCTAGTGTTCCAGCGGTATCACTTCACAATTACAGCCAGGAACAGCACTCGGTTGAACTGCTTCATCTCCTGACATTTCTAGCATTGTTTCTCATCTTTACTTCTCCAAACACCTTTTGCAAAATTTGCATCAGAAATGGCGGGAAAACATATGGACAAttgcatattcatatttgaaGGAACCTACCTATATAAgtaatgtataatacaatttcCATTACAGTAGCTAATGtcaaaagttaaagaaaaaaaaaaggaatatcaCATTCCAGCCTAGAGCAGAGTGAACTATGAGgcttgtttttggtttagaATTTAACCATTTGaagacacaaatatatatacgtTGAAGACATAATCTGCATATAACTTTTCCTAAGAGCAAGTTACTGAAACTGATGACTACAGATTGATCTTTGCTTATCTATTTACTTACAAACCCTTTTTATAAATGCTTATATCCAATAGAAGGCGCAGTGGCTTTAGAATAATAAGACTAATGTGCAGGTGCCATGTTGCCCTCCTGTGGTCATGAAGGGACTGAAACCTAAAAATTTGACTAAAGTTATTTTCTCTCCAAGTTTGAGAATTAATCTTGCCTGTCACAAAAATGGGGAAGTAAAATTTCAAGTGCTTGAAAACAATGAGGGAAATATGACCCCATGTTTcataaaatgaacaattaacAGCAAGAACCCCATGCTGAAGAAGCCAGACTTATTatcatttgattaaaacaaatatatcaatttGTGAATGATTCACATATACTGGGGTCTAAATCCACAACATTTGGATTGTGTCAAGACCAATTTAAAGCTAGTGGGAGAAAAGTAAATCCTTAATGAGGTACATGCCAcctcacaaaaaaataaaaacttttgaatttattacaaaacaatattgcaaaatatattatatttagtgTAGTGCAGTCTATCCCACTCTTTCACCTCCTCCTTCCAGAGTAAGAATATCGGCCTTTTTTATACAGTATTGCAAAGATAACCAACCAGGAGAAGTTCATTCTACCACAGAAATTAGCAGAGCTGACAAGCAGGTAATGTTTTTCTCAAAGCACCGAGATTAATAGTAAGTTGCATTATATCACTTTTAGGAACAAGGACATGAAAGAGGTGGGGAGATGCATTTGTTGATTCTCAGATGCCCCTAAACTAACTAAAATTTACCGTGCTGCCCAACCCCAACAAAAGTGTTACATGCATATATTGAACACAACAAATTTGCTGCACCAAGTGAGAACTTTAAACGGTTTCACAAACAAAGGTTTTCGCCAGGAAGCATCAAATTATCTCCTTAAAAGAGACAACTGTTAATTGCAACGCAAAGCACACTACCACACATTCAGCTGAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84007 True 2876 lncRNA 0.36 2 40841103 40904117

Neighbor

gene id symbol gene type direction distance location
AMCG00020998 LOC103141401,LOC108234925,LOC104934772,LOC106944545,LOC106529513 coding downstream 111477 40661926 ~ 40729626 (-)
AMCG00020992 NA coding downstream 310493 40530158 ~ 40530610 (-)
AMCG00020991 NA coding downstream 382640 40454892 ~ 40458463 (-)
AMCG00020984 pbdc1,LOC106568135 coding downstream 565465 40269641 ~ 40275638 (-)
AMCG00020985 NA coding downstream 613432 40211543 ~ 40227671 (-)
AMCG00021004 NA coding upstream 93690 40997807 ~ 40999658 (-)
AMCG00021003 NA coding upstream 96063 41000180 ~ 41004194 (-)
AMCG00021006 NA coding upstream 188752 41092869 ~ 41142694 (-)
AMCG00021008 NA coding upstream 462607 41366724 ~ 41367357 (-)
AMCG00021026 LOC108425180,LOC103036397,LOC106567972,LOC105015192 coding upstream 769492 41673609 ~ 41687703 (-)
G67183 NA non-coding downstream 266247 40573021 ~ 40574856 (-)
G67181 NA non-coding downstream 269107 40570327 ~ 40571996 (-)
G67103 NA non-coding downstream 549377 40291518 ~ 40291726 (-)
G67080 NA non-coding downstream 633666 40207179 ~ 40207437 (-)
G67058 NA non-coding downstream 835645 39895419 ~ 40005458 (-)
G67273 NA non-coding upstream 134691 41038808 ~ 41039096 (-)
G67277 NA non-coding upstream 147367 41051484 ~ 41052538 (-)
G67283 NA non-coding upstream 198602 41102719 ~ 41103224 (-)
G67298 NA non-coding upstream 352052 41256169 ~ 41264469 (-)
G67334 NA non-coding upstream 555346 41459463 ~ 41469248 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other downstream 200764 40557130 ~ 40640339 (-)
AMCG00020970 NA other downstream 1736236 39047704 ~ 39104867 (-)
AMCG00020943 NA other downstream 3208527 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 3773298 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 3795164 37020011 ~ 37045939 (-)
AMCG00021012 NA other upstream 691963 41596080 ~ 41602270 (-)

Expression


Co-expression Network