G67339


Basic Information

Item Value
gene id G67339
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41474305 ~ 41481139 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84113
CATTGGCTTTCTCCACTGATTCACTGCGTTTGAAGCCCTTCCTCTGGACAGCCTGGTGCTCCCTCTCCTGGTCTTCCCACTGCTGTTTCTCCTGGTCTCTGTCCTGAGTATCCTGCTTCTGCTGGTTCTTCTTCTGCTGATCAATCTGGCTAGCCCTTTCCTTGTCTCgcttctctctttctgttgcCTCCAGAGATTCTCTTGCCTTCCTCTCTTGATCCAAACGCtgcctctcctcctccaccttTAGACGCTCTTCCTGCCGCCGCTTCTCTTCATCTTTCT

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU84113 True 285 lncRNA 0.53 3 41474305 41481139

Neighbor

gene id symbol gene type direction distance location
AMCG00021008 NA coding downstream 106948 41366724 ~ 41367357 (-)
AMCG00021006 NA coding downstream 331611 41092869 ~ 41142694 (-)
AMCG00021003 NA coding downstream 470111 41000180 ~ 41004194 (-)
AMCG00021004 NA coding downstream 474647 40997807 ~ 40999658 (-)
AMCG00020998 LOC103141401,LOC108234925,LOC104934772,LOC106944545,LOC106529513 coding downstream 744679 40661926 ~ 40729626 (-)
AMCG00021026 LOC108425180,LOC103036397,LOC106567972,LOC105015192 coding upstream 192470 41673609 ~ 41687703 (-)
AMCG00021027 NA coding upstream 493720 41974859 ~ 41975161 (-)
AMCG00021028 NA coding upstream 519510 42000649 ~ 42117898 (-)
AMCG00021031 slc25a37,LOC107393770,LOC103371456,LOC106585578 coding upstream 756102 42237241 ~ 42238378 (-)
AMCG00021032 slc25a37,LOC107093885 coding upstream 764858 42245997 ~ 42269261 (-)
G67334 NA non-coding downstream 5057 41459463 ~ 41469248 (-)
G67298 NA non-coding downstream 209836 41256169 ~ 41264469 (-)
G67283 NA non-coding downstream 371081 41102719 ~ 41103224 (-)
G67277 NA non-coding downstream 421767 41051484 ~ 41052538 (-)
G67273 NA non-coding downstream 435209 41038808 ~ 41039096 (-)
G67352 NA non-coding upstream 26580 41507719 ~ 41508093 (-)
G67358 NA non-coding upstream 37578 41518717 ~ 41520497 (-)
G67360 NA non-coding upstream 69276 41550415 ~ 41570291 (-)
G67368 NA non-coding upstream 111382 41592521 ~ 41592729 (-)
G67440 NA non-coding upstream 409899 41891038 ~ 41893984 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other downstream 833966 40557130 ~ 40640339 (-)
AMCG00020970 NA other downstream 2369438 39047704 ~ 39104867 (-)
AMCG00020943 NA other downstream 3841729 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 4406500 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 4428366 37020011 ~ 37045939 (-)
AMCG00021012 NA other upstream 114941 41596080 ~ 41602270 (-)

Expression


Co-expression Network