G67398


Basic Information

Item Value
gene id G67398
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41890671 ~ 41893979 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84188
tggataatgatgatgatgatgatgattatgactGTACTTGAAAAAAATGTGAACAACATTAAGTCATTATTGGAGATCACAAGGTCACTTTCTATGATGGTACATTCAGGAGGAGCAAGTTTCATTGGCATCTGAAATGACAGGTGCATGTTTACATGTCTCAATAATTATAAATTGCCCTCCTGAATGCATATCTTTggagaaattataatttaaaatcattttggTAAGTGAAggcatttaatattatattgataggCTTATAACAACCCTTTTAAGAACAAAGATCGACTTTTTGAATATATCTAAGAATTCGGtcttatttgtacatttaaaatttaaaaacaattaaaaaaacaacaacaatgaatgAGGCTTACTTTTTGTAATTAGCAATGGAATAAGTCTATACAGAAAGTTATCAATACAGGATTTTAATCTCAATAACAACTTTTGTGGATTCGTtctattagtttattttaaagagccCTGCTATATTATCCAAAATCCTTCTGCTGGACCTTACCCTGAATTGCCAGAAGCTACTATATTTGTCTGCTCAGTTGTATGCATAGTTCTGTTATGCAGGACtctgtaatatttaaaacaattcctTAGAAAGTTAAGACAATGCAATAATACTGCGATTAATCTAAATGTAGTAAATGTATTGCTGCTTCTTCCAGAATTTAGATTTGGTGACAAAATGGTGACAGCAGCAACACAATTTAAGATATGCCCTGGATAATTTGGTGCTTATTAGGCCTGGACAATAAATTCCAAtagaaaatctaaaacaaaatggtgAAAACAGCCAGTAAAATCAATTTCAGCTGCTTCTTCTCCTCATACCTAGGCTggaaacatacagtatatataatttcagttttcatttacttCCAGATAATACATGCCTTTGTACAATGTGTTTGTACTTGCCTTTTGCAGTGAAGGgttgtttagttttataaaaATTGTTTCATGAGTTCATTTAAGCCATGAATGGGGTGCTTTATAGGGTTTATGTATAGGTTTTATCTCCTCGTAGAACAGAAGTCACCAGAActtaattagaaaatattttatagaGCTTGGATATTTTTGTCAATTGGTCTACACCTGCCTTTGATAGAGAAAGAAGAGCCTAGTGAACCAGTAAGGAGTTGACAAGCCATACAATCTACAGCATTATCCttcttacatttatatttctcatCTTATTTTGTTGCTGCATTTTTTTAGATAAGCTCAGATAATTATTTACTGGAAATCCTGCTTATATATTATTGACACATATTCTAGATTGTTTAACCTTGGTGTGCAAAGGCTGGGCCttcaacaaataataaaaaaaaacaaaggctcTTTTCAACTCTTTTTAACAGAGCTGGAGAATGGCTCTTGAGTGAGTGGTGCAGATCCCATACAGTTTTCCAGATTGTGTTGCATAAAAGTGGCagatttttgtctgttttcagcTGGCCACAATTTTTATGTCATCCTGGCTGGACATGTACCAGCCCTACAACTAAATACCTTATATAACTGTATGTTTTCTACATTATGTTGTGGGGGGATAATACTTTCATAAAACAATACTGGattgtttgtatttgattaCCTCTGTATTGAAATtaagagttttgttttgattaataaagAAGAACTTCTCTTCTTAATTAATTTTTGAAGAGCTCttcattataaaattaaagaaatggaAGGCAGGTTACCCAGTAACCATAATaagattttgtgattttaaaacaaatatgtgataTTCCAAAACtgagtaaattattatttgtgttttatatgaaaaagaCCCCAAAaagccattttatttaattaggatATAgcttgtattactttattaatgGATATCAGTAGTTTGCATTTGTATACTGTTTGGCCTCTTTTGCCAAATTACTGCTGAGTTTGGAATTCAATTGCttaagaaataaatgacaaattttagggactgttgttgttttgttgggCATCCATTAGCTGTGACCTCACATAATCATTCTGGTGCACTGGAGCTTCACTGTAAAGACCACTTGGaaatgaatactgaaaacactacatttatacttatttaatttgaaatacaagTACACTGTATATAAACTTGTAAATTGATATGTGTATGGGATTGTGTTGAAGCTGTTTTCCGAATACTTTTTTGGTTTCTTCAAACTGTCTAAATAGAGCAAAGCCCACCTTAGCTGCATTCCAAAGATGGgggacaattttttttttctctagttCAAATCATGCTTCTTGTAGTTTGCCCAACCaagtaatatgtattattcatataataataaaacattttaattcatacagTTTTGGAAAAGTTCccaaacaaaggaaaactttGTGAATAGAAGGGAACATCTAAGACCATAAGATGACCCAGTAGATACCTAAACATCATACTTTAcatagacatacatacatacatagactcCAAACCTTAACAATGTTCTTCTATAAAAACTAAATCCGTCTTTCTTATGCCCCGGGAGGGACTATTTCAGGTGGTGTTCACTTTTAGAAAATTAGGAGAAAATTGTTTACTGGAGCTAAAGCTTAGAAATGGTCCTCTAGATCATAATATTTTGCACAGCAAAGACTGTCAATGGGGTAGGACTGATATAAATGAGGTATTAAACATGCTACTTCAAGGTGAAATGGGATGGGGTTTTGGGCTGTTTAAACTGGCCTAGTCATTTCAATCAATAGTATTTAAggatgggggaaaaaattaagctGGAATATGTGTGCTTTGAAATGAGAGGCTTTCCACTGTAAAAATGATAAAGATAAATGTTTGCCTAATGTGATCAGTTTAAATATCGGTAGAGAATTCAGAGAGGGTTATCAACATATAGTGAGAACAGTTAAACAGAGTAGGGCTGATGTACTTCcacaatttattataaaatagcTCACccttttttgtaaaaatgttatatgGAGGTTTTAATCAAAGTACTTTTCCTTACTAAGGTTCTGCTTTTCTGTACAGAACATTGGGAGGAGAAGCAGCCTATTCACTGTCTTTTTTGAAGTAATTTAATACTTTAttgtttctggttttgttttttaaaacaataaaggaaTTTGATATCCcccaatagttttttttaatagttattattaataggaCCTACCATAGGGCAGTATTTAAATGGACAACATCCTATAACATTTTAACTTGTAGTAGCAGCATTTAACTTTCTTTTGTATTTGATGTTattgtttgtactgtatttcatcacaaattgtatattaaatatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84188 True 3309 lncRNA 0.32 1 41890671 41893979

Neighbor

gene id symbol gene type direction distance location
AMCG00021017 LOC106585609 coding upstream 28793 41841031 ~ 41861878 (+)
AMCG00021018 gpat4,LOC102786815,LOC106585610 coding upstream 107824 41755505 ~ 41782847 (+)
AMCG00021022 NA coding upstream 150534 41711921 ~ 41740137 (+)
AMCG00021020 NA coding upstream 180442 41709478 ~ 41710229 (+)
AMCG00021021 NA coding upstream 181384 41700865 ~ 41709287 (+)
AMCG00021019 NA coding downstream 854 41894833 ~ 41934745 (+)
AMCG00021023 NA coding downstream 89404 41983383 ~ 42015154 (+)
AMCG00021025 NA coding downstream 168738 42062717 ~ 42091656 (+)
AMCG00021024 NA coding downstream 228838 42122817 ~ 42125001 (+)
AMCG00021034 NA coding downstream 731405 42625384 ~ 42919615 (+)
G67393 NA non-coding upstream 36002 41737247 ~ 41854669 (+)
G67371 NA non-coding upstream 271062 41619295 ~ 41619609 (+)
G67322 NA non-coding upstream 382570 41507607 ~ 41508101 (+)
G67310 NA non-coding upstream 492997 41332266 ~ 41397674 (+)
G67309 LOC105030512,LOC106569888 non-coding upstream 585450 41304187 ~ 41305221 (+)
G67405 NA non-coding downstream 90632 41984611 ~ 41985031 (+)
G67479 NA non-coding downstream 255580 42149559 ~ 42149967 (+)
G67519 NA non-coding downstream 501746 42395725 ~ 42395996 (+)
G67521 NA non-coding downstream 509842 42403821 ~ 42404266 (+)
G67528 NA non-coding downstream 579679 42473658 ~ 42473885 (+)
G67323 NA other upstream 288558 41598223 ~ 41602113 (+)
AMCG00021005 LOC106580519 other upstream 828144 41051472 ~ 41062527 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other upstream 1320456 40555966 ~ 40570215 (+)
G67108 LOC100846954 other upstream 1568850 40321113 ~ 40321821 (+)
AMCG00020954 NA other upstream 3753598 38117062 ~ 38137073 (+)
G67459 NA other downstream 158951 42052930 ~ 42053675 (+)
AMCG00021029 sfrp1,LOC104937559,LOC106585130,LOC105889956 other downstream 529364 42423343 ~ 42465886 (+)

Expression


Co-expression Network