G67440


Basic Information

Item Value
gene id G67440
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41891038 ~ 41893984 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84234
gcatcaatatttaatatacaatttgtgatgaaatacagtacaaacaatAACATCAAATACAAAAGAAAGTTAAATGCTGCTACTACAAGTTAAAATGTTATAGGATGTTGTCCATTTAAATACTGCCCTATGGTAGGtcctattaataataactattaaaaaaaactattgggGGATATCAAAttcctttattgttttaaaaaacaaaaccagaaacaaTAAAGTATTAAATTACTTCAAAAAAGACAGTGAATAGGCTGCTTCTCCTCCCAATGTTCTGTACAGAAAAGCAGAACCTTAGTAAGGAAAAGTACTTTGATTAAAACCTCcatataacatttttacaaaaaaggGTGAgctattttataataaattgtgGAAGTACATCAGCCCTACTCTGTTTAACTGTTCTCACTATATGTTGATAACCCTCTCTGAATTCTCTACCGATATTTAAACTGATCACATTAGGCAAACATTTATCTTTATCATTTTTACAGTGGAAAGCCTCTCATTTCAAAGCACACATATTCCagcttaattttttcccccatccTTAAATACTATTGATTGAAATGACTAGGCCAGTTTAAACAGCCCAAAACCCCATCCCATTTCACCTTGAAGTAGCATGTTTAATACCTCATTTATATCAGTCCTACCCCATTGACAGTCTTTGCTGTGCAAAATATTATGATCTAGAGGACCATTTCTAAGCTTTAGCTCCAGTAAACAATTTTCTCCTAATTTTCTAAAAGTGAACACCACCTGAAATAGTCCCTCCCGGGGCATAAGAAAGACGGATTTAGTTTTTATAGAAGAACATTGTTAAGGTTTGgagtctatgtatgtatgtatgtctatgTAAAGTATGATGTTTAGGTATCTACTGGGTCATCTTATGGTCTTAGATGTTCCCTTCTATTCACaaagttttcctttgtttggGAACTTTTCCAAAActgtatgaattaaaatgttttattattatatgaataatacatattacttGGTTGGGCAAACTACAAGAAGCATGATTTGaactagagaaaaaaaaaattgtcccCCATCTTTGGAATGCAGCTAAGGTGGGCTTTGCTCTATTTAGACAGTTTGAAGAAACCAAAAAAGTATTCGGAAAACAGCTTCAACACAATCCCATACACATATCAATTTACAAGTTTATATACAGTGTActtgtatttcaaattaaataagtataaatgtagtgttttcagtattcatttCCAAGTGGTCTTTACAGTGAAGCTCCAGTGCACCAGAATGATTATGTGAGGTCACAGCTAATGGATGcccaacaaaacaacaacagtccctaaaatttgtcatttatttcttaaGCAATTGAATTCCAAACTCAGCAGTAATTTGGCAAAAGAGGCCAAACAGTATACAAATGCAAACTACTGATATCcattaataaagtaatacaagcTATatcctaattaaataaaatggcttTTTGGGGtctttttcatataaaacacaaataataatttactcaGTTTTGGAAtatcacatatttgttttaaaatcacaaaatcttATTATGGTTACTGGGTAACCTGCCTtccatttctttaattttataatgaaGAGCTCTTCAAAAATTAATTAAGAAGAGAAGTTCTTctttattaatcaaaacaaaactcttaATTTCAATACAGAGGtaatcaaatacaaacaatCCAGTATTGTTTTATGAAAGTATTATCCCCCCACAACATAATGTAGAAAACATACAGTTATATAAGGTATTTAGTTGTAGGGCTGGTACATGTCCAGCCAGGATGACATAAAAATTGTGGCCAgctgaaaacagacaaaaatctGCCACTTTTATGCAACACAATCTGGAAAACTGTATGGGATCTGCACCACTCACTCAAGAGCCATTCTCCAGCTCTGTTAAAAAGAGTTGAAAAgagcctttgtttttttttattatttgttgaaGGCCCAGCCTTTGCACACCAAGGTTAAACAATCTAGAATATGTGTCAATAATATATAAGCAGGATTTCCAGTAAATAATTATCTGAGCTTATCTAAAAAAATGCAGCAACAAAATAAGatgagaaatataaatgtaagaaGGATAATGCTGTAGATTGTATGGCTTGTCAACTCCTTACTGGTTCACTAGGCTCTTCTTTCTCTATCAAAGGCAGGTGTAGACCAATTGACAAAAATATCCAAGCtctataaaatattttctaattaagTTCTGGTGACTTCTGTTCTACGAGGAGATAAAACCTATACATAAACCCTATAAAGCACCCCATTCATGGCTTAAATGAACTCATGAAACAATttttataaaactaaacaacCCTTCACTGCAAAAGGCAAGTACAAACACATTGTACAAAGGCATGTATTATCTGGaagtaaatgaaaactgaaattatatatactgtatgtttccAGCCTAGGTATGAGGAGAAGAAGCAGCTGAAATTGATTTTACTGGCTGTTTTcaccattttgttttagattttctaTTGGAATTTATTGTCCAGGCCTAATAAGCACCAAATTATCCAGGGCATATCTTAAATTGTGTTGCTGCTGTCACCATTTTGTCACCAAATCTAAATTCTGGAAGAAGCAGCAATACATTTACTACATTTAGATTAATCGCAGTATTATTGCATTGTCTTAACTTTCTAaggaattgttttaaatattacagaGTCCTGCATAACAGAACTATGCATACAACTGAGCAGACAAATATAGTAGCTTCTGGCAATTCAGGGTAAGGTCCAGCAGAAGGATTTTGGATAATATAGCAGggctctttaaaataaactaatagaACGAATCCACAAAAGTTGTTATTGAGATTAAAATCCTGTATTGATAACTTTCTGTATAGACTTATTCCATTGCTAATTACAAAAAGTAAGCCTcattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84234 True 2947 lncRNA 0.32 1 41891038 41893984

Neighbor

gene id symbol gene type direction distance location
AMCG00021026 LOC108425180,LOC103036397,LOC106567972,LOC105015192 coding downstream 203335 41673609 ~ 41687703 (-)
AMCG00021008 NA coding downstream 523681 41366724 ~ 41367357 (-)
AMCG00021006 NA coding downstream 748344 41092869 ~ 41142694 (-)
AMCG00021003 NA coding downstream 886844 41000180 ~ 41004194 (-)
AMCG00021004 NA coding downstream 891380 40997807 ~ 40999658 (-)
AMCG00021027 NA coding upstream 80875 41974859 ~ 41975161 (-)
AMCG00021028 NA coding upstream 106665 42000649 ~ 42117898 (-)
AMCG00021031 slc25a37,LOC107393770,LOC103371456,LOC106585578 coding upstream 343257 42237241 ~ 42238378 (-)
AMCG00021032 slc25a37,LOC107093885 coding upstream 352013 42245997 ~ 42269261 (-)
AMCG00021030 NA coding upstream 408942 42302926 ~ 42315442 (-)
G67368 NA non-coding downstream 298309 41592521 ~ 41592729 (-)
G67360 NA non-coding downstream 320747 41550415 ~ 41570291 (-)
G67358 NA non-coding downstream 370541 41518717 ~ 41520497 (-)
G67352 NA non-coding downstream 382945 41507719 ~ 41508093 (-)
G67339 NA non-coding downstream 409899 41474305 ~ 41481139 (-)
G67462 NA non-coding upstream 181339 42075323 ~ 42075754 (-)
G67480 NA non-coding upstream 255609 42149593 ~ 42149966 (-)
G67522 NA non-coding upstream 509837 42403821 ~ 42404270 (-)
G67534 NA non-coding upstream 589601 42483585 ~ 42484218 (-)
G67537 NA non-coding upstream 691843 42585827 ~ 42586109 (-)
AMCG00021012 NA other downstream 288768 41596080 ~ 41602270 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other downstream 1250699 40557130 ~ 40640339 (-)
AMCG00020970 NA other downstream 2786171 39047704 ~ 39104867 (-)
AMCG00020943 NA other downstream 4258462 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 4823233 37061595 ~ 37067805 (-)

Expression


Co-expression Network