Gene
RNA
| Item | Value |
|---|---|
| gene id | G67479 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 42149559 ~ 42149967 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU84275 | True | 409 | lncRNA | 0.48 | 1 | 42149559 | 42149967 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021024 | NA | coding | upstream | 24558 | 42122817 ~ 42125001 (+) |
| AMCG00021025 | NA | coding | upstream | 57903 | 42062717 ~ 42091656 (+) |
| AMCG00021023 | NA | coding | upstream | 134405 | 41983383 ~ 42015154 (+) |
| AMCG00021019 | NA | coding | upstream | 214814 | 41894833 ~ 41934745 (+) |
| AMCG00021017 | LOC106585609 | coding | upstream | 287681 | 41841031 ~ 41861878 (+) |
| AMCG00021034 | NA | coding | downstream | 475417 | 42625384 ~ 42919615 (+) |
| G67405 | NA | non-coding | upstream | 164528 | 41984611 ~ 41985031 (+) |
| G67398 | NA | non-coding | upstream | 255580 | 41890671 ~ 41893979 (+) |
| G67393 | NA | non-coding | upstream | 294890 | 41737247 ~ 41854669 (+) |
| G67371 | NA | non-coding | upstream | 529950 | 41619295 ~ 41619609 (+) |
| G67322 | NA | non-coding | upstream | 641458 | 41507607 ~ 41508101 (+) |
| G67519 | NA | non-coding | downstream | 245758 | 42395725 ~ 42395996 (+) |
| G67521 | NA | non-coding | downstream | 253854 | 42403821 ~ 42404266 (+) |
| G67528 | NA | non-coding | downstream | 323691 | 42473658 ~ 42473885 (+) |
| G67533 | NA | non-coding | downstream | 333561 | 42483528 ~ 42483927 (+) |
| G67536 | NA | non-coding | downstream | 435860 | 42585827 ~ 42586035 (+) |
| G67459 | NA | other | upstream | 95884 | 42052930 ~ 42053675 (+) |
| G67323 | NA | other | upstream | 547446 | 41598223 ~ 41602113 (+) |
| AMCG00021005 | LOC106580519 | other | upstream | 1087032 | 41051472 ~ 41062527 (+) |
| AMCG00020993 | atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 | other | upstream | 1579344 | 40555966 ~ 40570215 (+) |
| G67108 | LOC100846954 | other | upstream | 1827738 | 40321113 ~ 40321821 (+) |
| AMCG00021029 | sfrp1,LOC104937559,LOC106585130,LOC105889956 | other | downstream | 273376 | 42423343 ~ 42465886 (+) |
