Fish Transcriptome and Expression Database

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ecological fish

G67536

Basic Information

Item	Value
gene id	G67536
gene name	NA
gene type	non-coding
species	bowfin (Amia calva)
category of species	ecological fish

Chromosome Information

Item	Value
chromosome id	CM030127.1
NCBI id	CM030127.1
chromosome length	42978078
location	42585827 ~ 42586035 (+)
genome version	AmiCal1_2021_bowfin_Genome

Sequence

>TU84336
GACAACATAGTGTGGTGTTACTCTTGCTGGCAACCTCTCTACGATGATTtggctttgaaaaaaaataatctgaaatttGTGCAAGGTCTCCCCGCCTCGTTGTGTGACGATGACTTGTTCCCGCCCGGTCAAACTAATCTAGTGATCCTTGATGACCTGATGGAGCAGGCCGGTGACAACAGTGAAGTGGAAAAAGCCTTCACAAAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU84336	True	209	lncRNA	0.46	1	42585827	42586035

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
AMCG00021024	NA	coding	upstream	460826	42122817 ~ 42125001 (+)
AMCG00021025	NA	coding	upstream	494171	42062717 ~ 42091656 (+)
AMCG00021023	NA	coding	upstream	570673	41983383 ~ 42015154 (+)
AMCG00021019	NA	coding	upstream	651082	41894833 ~ 41934745 (+)
AMCG00021017	LOC106585609	coding	upstream	723949	41841031 ~ 41861878 (+)
AMCG00021034	NA	coding	downstream	39349	42625384 ~ 42919615 (+)
G67533	NA	non-coding	upstream	101900	42483528 ~ 42483927 (+)
G67528	NA	non-coding	upstream	111942	42473658 ~ 42473885 (+)
G67521	NA	non-coding	upstream	181561	42403821 ~ 42404266 (+)
G67519	NA	non-coding	upstream	189831	42395725 ~ 42395996 (+)
G67479	NA	non-coding	upstream	435860	42149559 ~ 42149967 (+)
G67564	NA	non-coding	downstream	305993	42892028 ~ 42892439 (+)
AMCG00021029	sfrp1,LOC104937559,LOC106585130,LOC105889956	other	upstream	119941	42423343 ~ 42465886 (+)
G67459	NA	other	upstream	532152	42052930 ~ 42053675 (+)
G67323	NA	other	upstream	983714	41598223 ~ 41602113 (+)
AMCG00021005	LOC106580519	other	upstream	1523300	41051472 ~ 41062527 (+)
AMCG00020993	atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473	other	upstream	2015612	40555966 ~ 40570215 (+)

Expression

Co-expression Network