AMCG00021053


Basic Information

Item Value
gene id AMCG00021053
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 981937 ~ 1011465 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021053
ATGCCAGCGAGGGTTGATAGTGACCCTGGCAGATTCCTGACTCCTGCAGATTCCTGCCCGGTCCTGTGCAGCGGCAACGGGGAGTACGAGAAGGGCCACTGCCTGTGTCACCCAGGCTGGAAGGGCCCCGAGTGCGACATCCAGGAGGACCAGTGTGTAGACCCCACCTGCTCCAACCATGGCAGCTGTGTCAAGGGGCTGTGCGTCTGCATCCCCAGCTACAAGGGCCACAACTGCGAGCAAGTGGACTGCCTGGACCCCTCATGCTCGGGCCATGGCGTGTGTGTGAAGGGGGAGTGTCTGTGCTCGCCGGGCTGGGGGGGCATGAGCTGTGAGAGCCCCCTGCCGTCCTGTCAGGAGCAGTGCTCGGGCCACGGGACGTACCTGCCAGAGACGGGCAGCTGCACCTGCGACTCCAGCTGGACCGGCTCCGACTGCTCCACCGAACTGTGCCCGGTGAGCTGTGGCAGTCACGGCACGTGCACGGCGGGGGAGTGTCGGTGTGAGGACGGCTGGGAGGGATCCACCTGCGACCAGCGCGCCTGCCACCCCCGCTGCGAGGAGCACGGCCAGTGCAAGGACGGGAAGTGCGAGTGCAGCCCGGGCTGGGAAGGGGAACACTGCACCATCGACGGCTGTCCCGGCCTGTGCAACGGCAACGGGAGATGCACGCTGGAGCAGAACGGGTGGCACTGCGTATGCCAGGCCGGCTGGAGCGGCATGGGCTGCAGCGTGGTCATGGAGATGGTGTGCGATGACAACACAGACAATGACGGAGACGGCTTGATGGACTGCGTGGATCCCGACTGCTGCCAGCAGGCCAGTTGCTACAGCGGGCCACTCTGTCAGGGCTCCCCGGACCCCCTGGACCTGATCCAGCACAGCCAGACCCCCTTCACCCAGCTGCCCCCACGGCTCTTCTTCGAGAGGGTCCGGTTCCTCATCGGCAAGGACAGCACCCACGTCCTGCCCGGGGACGTCCCGTTCGACAGCAGCCGAGCATCCGTGATCCGTGGGCAGGTGGTGGCGGTGGACGGGACACCGCTGGTGGGCGTGAACGTCAGTTTCCTTCTCCACGCCGAGTACGGCTACACCGTCAGCCGGCAGGACGGCAGTTTCGACCTGGTGGCCGCTGGGGGGATCTCGGTCACCCTCGTGTTCGAACGCGCGCCCTTCATGACCGAGAGGCGCACCGTCTGGCTGCCCTGGAACCAGTTTGTCGTGCTGGAGAAGGTGACCATGGCCAGAGTGGAGTCGCCCACGCCCACCTGCGACATCAAGAACTTCGTCAGCCCGTACCCCATCGTCCTGCCCTCACCGCTGACCACCTTCGCGGGCGCCTGTCCCGAGCGGGGGCCGGCCATCCCGGAGCTGCAGGCCGTCCAAGAGGAAATCACCATCCCCGGCAGCTTTGCAAGGCTCAGCTACCTCAGCACTCGCACCCCCGGCTACAAATCCCTTCTGCGCATCATCCTGACCCACTCCGTCATCCCCCTGGGGCTCACCAAGGTGCACCTGATGGCCGCCATCGAGGGGAGGCTGTTCCAGAAATGGTTTCCAGCTGCGCCCAACCTGGCGCACGTCTTGGCCTGGAACAAGACTGATATCTACGGGCAGAAAGTGTCTGGTCTGACCGAAGCCACTGTGTCAGTGGGATACGAGTTCGACTCGTGCCCGGACTTCATCGTGTGGGAGAAGAGAACGGCGCTGCTGCAGGGCTTCGAGATGAACGCCTCCAACCTGGGAATCCTACACAAAGGAAACGGAGAGAACGTCTTCATTTCCCAGCAGCCCCCCGTTGTCACCACCATCATGGGGAACGGGTACAACAGGAAGATCCCATGCCCCAGCTGCAACGGCCCCGCCCTGGGGAACGAGCTCTTCGCACCCGTGGCGGTGGCCTGTGGCTCCGACGGCAGCATCTACGTCGGAGACTTTAATTTCATCCGGCGGATACTTCCCAGCGGCTACGCTATGAGCATTTTAGAGCTGAGCACGAGCCCGGCTCATAAATACTACTTGGCTATGGATCCGGTGAATGAAGCCCTGTATCTGTCGGACACCAGCAGCAGGAAGGTGTACCGACTGAAGTCGCTCACCGAGCCGAAGGATCTGGCGAAGAATGCTGAGGTGGTGGCCGGGACCGGAGAGCAGTGCATGCCCTTCGACCAGAGTCACTGCGGGGACGGGGGCAAAGCCACAGAGGCCTCTCTCAACAACCCCAGAGGATATGTGACAGAGAGCATTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021053 True 2250 mRNA 0.64 12 981937 1011465

Neighbor

gene id symbol gene type direction distance location
AMCG00021051 LOC106567800 coding downstream 24016 928292 ~ 957921 (-)
AMCG00021048 thoc2,LOC107733416,LOC107741598 coding downstream 149162 780726 ~ 832775 (-)
AMCG00021042 nxt2,LOC107600148,LOC107561287,LOC106604300 coding downstream 651105 330099 ~ 330832 (-)
AMCG00021041 NA coding downstream 692431 287247 ~ 289506 (-)
AMCG00021057 LOC106603321 coding upstream 1074 1012539 ~ 1025365 (-)
AMCG00021056 LOC106567800 coding upstream 17956 1029421 ~ 1041823 (-)
AMCG00021054 LOC106603321 coding upstream 100923 1112388 ~ 1114528 (-)
AMCG00021055 LOC106567800 coding upstream 120029 1131494 ~ 1132630 (-)
AMCG00021059 LOC106567799,LOC105028962,LOC106603320,LOC103034185 coding upstream 662420 1673885 ~ 1692615 (-)
G83205 NA non-coding downstream 55373 922859 ~ 926564 (-)
G83091 NA non-coding downstream 896810 84874 ~ 85127 (-)
G83081 NA non-coding downstream 945046 36247 ~ 36891 (-)
G83294 NA non-coding upstream 843417 1854882 ~ 1865227 (-)
G83342 zc3h12b non-coding upstream 1068204 2079669 ~ 2080014 (-)
G83343 NA non-coding upstream 1071712 2083177 ~ 2086079 (-)
G83346 NA non-coding upstream 1093599 2105064 ~ 2106398 (-)
G83352 msn,LOC106567791,LOC102776036 non-coding upstream 1128825 2140290 ~ 2141743 (-)
G83313 NA other upstream 961695 1973160 ~ 1977968 (-)
G83428 NA other upstream 1445536 2457001 ~ 2459379 (-)
AMCG00021090 NA other upstream 1666120 2677585 ~ 2718919 (-)
G83761 NA other upstream 3691790 4703255 ~ 4751235 (-)
G83864 NA other upstream 5533027 6544492 ~ 6546577 (-)

Expression


Co-expression Network