AMCG00021077


Basic Information

Item Value
gene id AMCG00021077
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 2230508 ~ 2245691 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021077
CGATGAAGAGAGATTCACAAAAGACATCCTTCCCAAATACTTCAAGCACAATAACCTGTCCAGTTTTGTCCGACAGCTGAACATGTATGGATTTCGAAAGGTGATCAGCATAGAAGGCGGCCTTGTGAAGCCAAAGCAGCACACCGCTCTCGAGTTCCACCACCCGCATTTTCAGCGGGGCCAGGAGGAGCAGCTGGAGCTGATCCGACGCAAGGTGTCCTCAGTCAGAACAGAAGATACCAAGATAAGTCAGGAAGATATGTACAAAATACTGGAGGATGTGCAACAAGTCAAAGGCAAACAAGAAGATATGTTCCAGAAGATTGAAAGCATGAAGAGGGACAATGAGATGTTATTGAAAGAAATTGTGTCACTCAGAAGAAAGCACAATCAACAGCAGAAAACACTCTCCAAGGTGATTCAGTTCATTCTTAGCCTCGTTCAAGGAAACTGTGTCTTTGGAATCCAGAGGAAAAGACCACTCACACTAGACAGTTCAGAGGCACCACCTGCAAAGACCAGAAAAGCCTTCGTCCTGAGAACCCACGAGAGCCCTGCTCCTATGAACAGCTCGAGCAGCAACTCGGCTGCTTCTCCAGGCAGGGTCACCATCCTGGACGTCACAAACAACCCCAAGGAAAACACAAGCGATGCGGCGTTTCCTGTGGTCTCACAACAAGTCACAACGCATAAGCCAGAGAAGGTGTATAACTTTCTCGATGTCACAAGCAGTGAGATGCTGGATGATTCACAAACAGACCTGGGAGGTTCCTggGCTCTTCCATCAAGTCATCTGGCTTTGGAGGCTTGTGATAATGGCACCTCAATGTTTTCTACCGTGGGACTTCAAATACCAACCAGCCAGGCTGCCGGCAAAGAGACTATTATGTGCAAAACCTGGAAAACCAGCTCATCATCCCAGATCAAACAAGAAGCTCCCATTTTTCCGGACATCCTTCCAGACTGTGTCATGAAAGAAGTGACTCCTTCAGTGAGCAAAACTGCCACCACCAAAACCAAGAATGACATTCAGGAGACCATAGACTGTATAGATTCCAGTTTCGAAGACATTCAGTCGTTGCTGCTGGGAAAGCAGTTCAACATCAGGCCCGAGTTCATCAGTGATTTGTTTAATCCTGGTATGTCAGCTGCGGAAATAAACATGCCTGAGAGTGACTTTAACCTGGGACCCGTTTCAGAGTGGCTTGAGAACACAGCTGACGTGCCAGAGACGAGCAAAGGAAACGAAGTGGTCCAGTCTACACCGGCACAGATCCTCAGTGTCCTGGACACGCTGTGCAACAACTTAGACCCGGAGAAGAGACGCAGCgatggttctctctctctgttggctGAAGACAGCCCGCCCCCTCCTGTGACAGAGTCCCAGTTAGGTGAAACAGACCTCACTTTTCCGCAGGATTTGCTCAGCCTGTGTGACCAGACTATGTGACCAAACCTCGATTCCATGAATGTGACTGTAAAACATCAACATCCAGCTTCCATAACTCCTCTCCTGTCCAGACACGAGGCTATCtgactgttgttgtttttcataacaCATACTGCGTTGTGTTTTCTCAACCCACCTGTTTGTTCATtaagaaagcaaaacacacaaacttcaGACTGATTCAACAAACATGTTGTACGATGTTCTGTTCAGTTTCTCTCTGtccatgtatttaaatttcagGCCGATATACAGAACAGGCTGCACTTTTAAAGTCATTTAATCCAAAATAAACTGTGGTAGTATATTACTAAACTTGCTTTAAAAGTGTGCAGTCtgctttttgtctttcattggATATAGTGATAATGTATTACCTAATCTATTCCTTAAGTGAGTGCCTGCAGTCATTGTGCactaatacatttacaaaaaagggATTGTACGGACCACTATGGATTATTTCCTGGTAATAGTAATTAAGCATCCACAGTCAAATGTTTGTTAAATCCTTGTCTGTCCTAAAACTCAATGATCGTCCATACAGACACAGGGGAAGTGCAGGTGGAGGACAAATTGATAACAGCGCCCCCACTTGGACAAAATTATGATTATCTTTCCCCAtcagttagtgtgtgtgtccagcTGTGTGCCCCGTCTGAACAGCACCATGCATAGGGCTCAGCTCCGCCCCGTCTGAACAGCACCATGCATAGGGCTCAGCTCGTCCAGATCCAGACTGTAGCTTTCTGTGCAGGACGAGAGATTCTTCCCATTCGATGCTGTGCTTCAGCGGGGTTTCCAGTCTTCAGAGCGTTCATTTTCTCCTCTGAATTATGTTATTGAGATGGCTGTGGTTTCcctcctgtttttgtttttggactgTATGCTTCCGCCTGTTTCTTTAGAAAGAGCTCCTTACAGTGTTTAAGAGCAGGCATCCCACTGCTGGCTCAACAACTAGcttcttattttctgttttatgtattcaaGCAAGTCAGACAAAGATGTTTTCAGCCACCCTTTGATACTTACCAAGCacctgttatatatatatttcatacagatatgttcagttcagttcagtgtaattaaattaaaatgcagggtAAATACGTTAATAAACTACAGCAATATACATGCATAAGGTATATTAAAGCCTTTACCagcaaatgttatttatacatatttgtcttgttattttcatttactttttttgtgaATTTGTAGGAGTAACTGACTGTTTTGGAATGAGGGCCGCCAGTAATTCAAGATCCTAACAGATACTTGTTCATCCTACTTCACTGCTGCTGAGGTTGGCAAGGCTGTTTAAATTGCACTTTACTGCTGTCTCTTTCactcctttttttgttttaaaggttgtCTCGAAGGTCACGTTTGCTCATCACAGGGATGTGTGCTTATTCTCCAAATGTCAGAACAtaattttctttaacaaaaagGGATGCATGActtgaatattgttttatattatccTATCTTACATATTGTTCTATGGAagttttttgggggtgggggaggattTAATAGCttaagtatttaataaataagtacatctTACTCCCGAAGAATTGTCAGCCTCCATCCGTTCCATTATCTAACAATTAGCTAAATGTCAACCACAGtgagtctttttttcttcaacagcgtattattttataaataaagccaTGACATTTAATCCCATTCTGTCACAGTAAAATCTTTGTTGTTGTATCAGAGGAGATGTGCATCTCttatttgccattttatttcttgtggAGGCGTAAATAAGACTGTCTGCTTTCCCAGAATAAAGCTGGGCTGATTTGCGGTGCAATCGAAAGTGATCGGCTTCCTTCAGGAGAGGGGTAGGTTCGAAGACACTTCAAGAGAAGCTGAGGCCTACGCTGCGTAACTATAATTGCTATATATCGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021077 True 3394 mRNA 0.43 14 2230508 2245691

Neighbor

gene id symbol gene type direction distance location
AMCG00021078 NA coding downstream 53974 2157649 ~ 2176534 (-)
AMCG00021075 NA coding downstream 123622 2086626 ~ 2106886 (-)
AMCG00021072 zc4h2,LOC107557113,LOC107597258,LOC107663226,LOC107672730 coding downstream 173123 2049196 ~ 2057385 (-)
AMCG00021068 NA coding downstream 256400 1973785 ~ 1974108 (-)
AMCG00021069 NA coding downstream 256971 1969250 ~ 1973537 (-)
AMCG00021082 NA coding upstream 156483 2402174 ~ 2412334 (-)
AMCG00021085 NA coding upstream 277169 2522860 ~ 2576954 (-)
AMCG00021086 NA coding upstream 337639 2583330 ~ 2583617 (-)
AMCG00021091 LOC106603306 coding upstream 1009688 3255379 ~ 3265211 (-)
AMCG00021092 efnb1,LOC106603306,LOC106567780 coding upstream 1042303 3287994 ~ 3288740 (-)
G83371 NA non-coding downstream 39599 2190626 ~ 2190909 (-)
G83355 NA non-coding downstream 83391 2144404 ~ 2147117 (-)
G83352 msn,LOC106567791,LOC102776036 non-coding downstream 88765 2140290 ~ 2141743 (-)
G83346 NA non-coding downstream 124110 2105064 ~ 2106398 (-)
G83343 NA non-coding downstream 144429 2083177 ~ 2086079 (-)
G83422 NA non-coding upstream 108296 2353987 ~ 2354694 (-)
G83441 NA non-coding upstream 265633 2511324 ~ 2511549 (-)
G83442 NA non-coding upstream 269799 2515490 ~ 2517126 (-)
G83465 NA non-coding upstream 354818 2600509 ~ 2602840 (-)
G83481 NA non-coding upstream 444279 2689970 ~ 2690210 (-)
G83313 NA other downstream 252540 1973160 ~ 1977968 (-)
G83428 NA other upstream 211310 2457001 ~ 2459379 (-)
AMCG00021090 NA other upstream 431894 2677585 ~ 2718919 (-)
G83761 NA other upstream 2457564 4703255 ~ 4751235 (-)
G83864 NA other upstream 4298801 6544492 ~ 6546577 (-)
AMCG00021153 NA other upstream 4869729 7115420 ~ 7122491 (-)

Expression


Co-expression Network