AMCG00021078


Basic Information

Item Value
gene id AMCG00021078
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 2157649 ~ 2176534 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021078
ATGGTACCGGGCTTGTTGCCCAGTTTCAGCCCCAGTTCTGTCATTGACTCATGGTCTGCCCAAGTCCTGTGCTCTGTCCGTTACAAGATGAAGACGGCTATACAGAGACGCCGATCGGCCCCCTCAGCCATCACCAAAGCCCTCAGCAAATCCAGGACACCCAGCAGGGATGGGTCTCTCTCGACAGCCCCCTTCACCAACGGCTCTTTCATCCAGGCCTTCACATCCCAGACATCGACTTTCATCATGGAGGATCATGTCCGGCTTACAACTGGCCTGCAGACACAGGAGCGACACCTGTTCCTCTTCAGTGACATCCTCATCATAGCCAAGTCCAAGTCTTCCTCTAGCCTAAAGCTGAAGAAACAAGTGCGCCTGAGTGAGATGTGGATTGTGTCCTGCTTGGATGAAGTTTCGGAGAGGAAGCTGAGCCCAAAGAACTCGTTCGTGATTGGCTGGCCGACCACGAACTGTGTGGTCACCCTGAGctcCACTGAAGCCAAGGAGAAGTGGCTTTCTGCTCTGCAATGGCAGATCAGCGAAATGAAACGGGAAGAGTATCCAAAGAAAATAGCCATGAAGTTGATGCTTTTGGATGTGGGGAACTGCACTTCAACGACCACGGTGCACGTGGGCAATACCGATACGGCCGAGCGGGTGATAATGATCACGGCCCAACAACTGGGGATCTCAGGCCGGCCCAGTGACTACCATCTCTGGGTCATTTCAGGGAAGGAGGAAGCCCCCTACCCGCTTATTGGTCACGAGCATCCTTTCAGCATCATCATGAACTGCCTGCGGGAGTCGGTAGACGAGCCCTACCTGGCCAACAACAACATCCTGACGCCTGACGGGACACTTCTCCTGCACCTGCTTCCCAAAGAGCAGCAGTGCCAGTTCATCCTGAAGCCCAGACCAGCCCTCCGGTGCCACATGAGAACAGattCCTTTCAGAAACACTTTAAGAGGAAAAAATCCCTCATCGACTGGGCCCTGAGGAGAGGCAATGCCAGCCAGACAAACTGCCAGGTGGAGTCTCCCACTAATCCCAGGAAGCTCTTCGGTCACTCGTTGTCATCCATCTGCACCAATGGAAACCTACCGAAGCCCATCATGGATATGCTCTGCTTGCTCTACCAAGAAGGGCCTTCAACGAAGGGCATCTTCAGACGTTCGGCAAACGCCAAGACCTGCAAGGAGCTGAAAGAGCGACTGAATTCAGGAGACGCAGTCCAGGTGGAAGGGGAGTCAGTCTTTGTGGCCGCTGCCGTCATCACCTGGATGGAAGCCATGGAGATTGATGAGCAGGACGATAAGATTGAGGCCATGAAAAGGTTGGTGGACCGTCTCCCTGaagcaaatgtaattttactcCGTCACCTATTTGGCCTCCTGCACCACATCGAGAAGAGATCGGAGGAGAATCAGATGACCGCCTTCAATCTGGCTCTCTGTATCGCTCCCAACATCCTGTGGCTCCCCATGGCTACGGGGCCCGAGGAAGAAAGCAAATCCACGAGAAAGGTGGCAACACTAGTCCAGCTCTTGATTGAACACTCAGCCACCATCTTTGGCGACGACATCATGTCTCTGTACAAAGACATGAACAAGGAACAGCGGGAGAGTTCAGAGGATGCCATGGacGGGGACTCTTTTCAGCAGCAGTACTCCTCGGACGAATGTGATGCAGCCGAGCAAGAGAGGCGAAGAGAGCTCAACACTCCGGAGAGGGACTCGTACTTCCTGCCTTTAAACGATTCAATCCTGAAGGAAGGGAAGGAAGACTGGGGGCTTTTGGATAGCATCTGCACCTACAAAAAGGACGTTCTAACCGAAGACAGTGCCTACAGCTGTGAGAATTTGGATGATGTGTCCTTCCACTCCATTGGGTCCATCTGCTCCTTGGGTGGCACACAGAGCATCCAGTCGGCCCGGGACCGCTGTTCCTCTGAGCCAAGCGTGTGCATGAGCTCCCAGCTGCTCACCAGGCTTCACGCTCCAGTGGCCCGTCAGTCGAGCTGTGACGCAGCCATGACGCGGGACCCGACGGACTGCTTCCAGCACATGCAGAAGCTGCAAATGGAGCACTCAACTGTTCTGGAAAGAGACTCGAGCCCGAAGCTGAACAGCAAGTCCAGGTACACCTTTTGGCGGTCGCCCCAGATTGCTTCCAGGATCAGGAACCTGGGGCCACACCGGATGAATCTGTCCAACAGGTCGAGTTTCTCCAGCCTGTCTTCGTCTGCCACCTCTCCCTCTGCATCGTCTCTGAGTTCTCTGGACAGTGCCTTCTCCTACTGCTCCGACTCTGTGTTCTGTCCCAGCGACGTCCCCTCGTTGCCTTTCATGTTTGGGGCCTCTGCCCGGGTGCGGCCGCTTTCTCCCGACACCCCCAGTAAGTTTCCCAAAGAGTGGAGCATGACTCTGCCGTCTTCCATGGCTCAAGATCCTGGCGATTTGGAGTGGTACGACACCTATGATGAAAAGGACGAGGAGAACAATAACCGGAGCAGTGAGGCGGAGGATGCTGAGCACATCCAGACTCTGGAGGAGAAAGAGAGTGGCTCTGAAGACCCACGGGCCTTGAATGTCAACAGCTATGGGAGTGATGAAGACAGCAGTTCTGAAATTGAGGTTGAAGGGGTGGAATCAAATCCATCAGTCAGGAGGGAGCGAGAGGAAAAGCCAACAGAGCTTAATCTGGAGCCTGATACTTCAGAGACCCATATCAAGACACAATGCCGAGAGACGTCAGTGAAACACATAAAGCTGGTACGACCCCAAGGTTTGGTAGCTAATAAGGATAATAAGTTAAAACGTACAAAAATCACATTCTACATGTCCTCAAATAGGGTCacagtgaaaaaacacacagaccaaGCTGAGAAGGATGGGCACACGATTTCAGTAAGCATGTCCAACTCGAGCGATGCCTCTCCAGACCGGGCAGAAAAAGCCTGTCAAACACTAGAGGTCCACATCCCGCAGACTGTCTTTTACGGCCAGAAAACTCCTCTGGTTCTGCGGTCGGTGTCTACAAGTCATCCAGCAAACTCCGAAGACGAGAACAAACAGGTGAgaaccacagccagcagcactcCGATGGCAAGCTTGTGTGCAGAACAGAGTCCCGAATTTCTGGCAACGGCTAAGAGTCACGGCAAGACTGCCAGCGCGATCAGGCACACCATTCGGATACGCCTGCCGGCCGCTGTCAAGAACACCGTCAAGGAATATTTTAACCATGGTGACTCGAGGAGCAGTCAGTCGGATGTTAAAGCCGTGGAAAAGGAGCTCATGAGAAGCAAGTTGGAATGGCAGAGTAGGAGACACACGGTCGTGACGAAAGACATGTTTGGAAATGTCACACACGATGCAGAGTCTTTTGTCTGATACATGAACGCTACTAGATAGTTCGTTAAGTTGAGCCGAAAACGTGGAGAAAGTATTGTTCGATGTGCCAGAGATTTGGGGATGGGTATTCTAAGTATACTGATGCACTTACCAGTCACACCTATAAGTAAAGAAGGACAATTTGTGAAATTTCCCATGATGTGACACTCGAAGGACAAAGGCATTACTCGATTGTTATTGGTCACCCAGCTTCACCAGCTACGTCCTGCAGCTAGTCTGTTTAGATAGATGATATCCAAGGttttttgctgttttaataATATCTGAAGagggtacatttaaaaataaatatggttaACAGAAACCAATTGCTTTGTTTCAGGCGAGAGATTCCAGTTAGAAAGGACagataaatgtaaacaaagcactgacaaaaaataaatctaattaaataaaggaatacaGAAAGTTTCATGGGGTaatttaagaagaagaaaaaaactgtgataaaatatacatcaaCCTCTTGTTTTGTAGGAGAGAAAATGTGTACAATTTTTCAATAAGGTGTGTCCATCGGAAATGGGTGCTTATTAAAGCAAGAACATCAAATGTGAATAATCACATTTTTGCCCTATTTCTGTTAGCATCAATATGTTGTTTTCACTTTCTGTGCTACATCTTGAATGagaagcagtaaaaaaaaaacctgagcTGAAAGATGGGTGACTTAAATCAAATCTGTCCCCTATTTGTTTCTTATTGCCGACAGTATTAGAGATTGAATGAGAAAGTGATGCATGGACAATAAGATATGTGTGTTTCATGGCTGTTGCGGGGGGGAGGTCAGGGTTTTAgaagagtgaggaggagaaggtTTTCTCTGAAGGTCTTGATAAGTAAAGGTAAGAAAGCTACACTAGAAAGTGATTATACTATATGccaggaagagaaagagacgCTGATACAGCAGGAGGTTTTGGGTGAGAGCAGACATTTCCATGGGCTTCACATTCAAAATTATTCCCAAAGATGAATCCGCTCTACTGTATTCTCATGTCACACTCAACGAAAGTGTTTATGATACTGTCTACAAAATTGTACAATTTCTTTCCTGCAACTGAAGTCTTTTCTATAcctttttgtctttatatttaATATCGCATCAACAGGTACTAGTACGGTTCTGTTTCGACTAAATTGTCAAAGTCACATGTTAGTGACATTCTCTACTGACTGGTAGACTCTTATATACCTTGATGTATAAACAGAGAAAAGACTCTAGATCTTTAAACATCTCTGCTCTTTTAATAAACAGAGTCTGGGTTTACTTTAGGTGCTGAGCGCTTACGTGAGCTTTTTTAGGTTTAAAATCTTTCCGTGGTGAAATGCTGATGTTCAAAGGGAAGGAAACGTGTAAAAAAGACATGTCGACTGAATGCTTATTTCCTGTCATTTGTGTTGAAAATGGGGCCACAACACAGGGAATGAGCATGACAGAGAGACCAATGATTCACGGCAAAACTTCTTTGTCCAGGAGCGGAAAACTTACATTTCATGCTAAACTGAATACTGTCTGTAAAAAGTCGCCTGTAATCTGCAGAACGCTGACTGTTTCCAATCACCTGATCAATatctaagaaagaaagaaagtcatGCAAATCAATGAAACCTAATCAGCTGTTTTAATGCTATTTTGAAACATGTTGTATTTCCTTAAGACACCTCTCCACATGTGTCTGCTATTGTGTATATGTCGTTTCCtcacagtttttaaataaaagtattttaatgagTGGAGTGTGTGGGTTTTGTGAAGCACCGCAGCAGTTTTCTCAGCATGTGTGAGTTTGCAAGTCGACAACTTTCATCAGGCAGGTATAAAGTGACATGTTGCTGAGtggagaaacagaaaatactgaatAATCAGAGCTATTCCACCGAGATGCTGTTTTGCCATCAAAGCTCAAATCTGCTCTTCTGGAAACTCTGGGTCTCTTTTTATTTCATGCAAAACAGTAAAGCATTTGgagttttttttccagaaagtgtttacattttaaataaaacattttaaacagaaataaagctgTCCTACTAATTAACCACATTCAGACCAGAGGGACACATATCGCCAAAACACTAGGATACACCTTTGGGCCTGTGGGACTGACTCAGATGGATACCATTCAGGATTGACATCAGTAGAAATTGAATATGATGGGTGGCGGACAACGTGACAGTGACTCACTGTGATGATTGTCTTCGGGGGGGGATCCCTGCAGTTTCACCGAGAGAAAACAATGTCTGTGAAATGTGAATAATTCTCATTGTGACTTCATGCATACTTAATGGAGTCACAGTTAATTTTCTAGTGAGAGGAAATAATGATGTGGTTCAGATTATTAGTCTCTAATGTCCTGAATTATTTCAAGTTGATTTAATTTGCCAACTGCGTGAATTGAAAAGGAAGATCAAATATGGCCTTTTGCCTCCATTTGTTCCTGCCCTGCAACATCTACCAGTTTGAATCCCCTGGTACTTTCCAGTGGGGGGgaatgaatgcattaaaacaacttATTCCCAAAAACTGATGTTGACACACCAGCCCCTCGTGCCCTTTCTGTGTTATCATTGAATGGAAAGATAACATCTGTCCAGggaattacaatgttttaaaggGAATTACACCAGTCTGACCAAAGCATCAAGGAAACGAACACTGTTTCACTGAATATTTGTCTCTAATTCTCTGCCTCACACAGAACCCAGTGGCATCATGCCATTGGGGC

Function

GO:

id name namespace
GO:0035162 embryonic hemopoiesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021078 True 6146 mRNA 0.46 15 2157649 2176534

Neighbor

gene id symbol gene type direction distance location
AMCG00021075 NA coding downstream 50763 2086626 ~ 2106886 (-)
AMCG00021072 zc4h2,LOC107557113,LOC107597258,LOC107663226,LOC107672730 coding downstream 100264 2049196 ~ 2057385 (-)
AMCG00021068 NA coding downstream 183541 1973785 ~ 1974108 (-)
AMCG00021069 NA coding downstream 184112 1969250 ~ 1973537 (-)
AMCG00021065 LOC106603315 coding downstream 204773 1931558 ~ 1952876 (-)
AMCG00021077 NA coding upstream 53974 2230508 ~ 2245691 (-)
AMCG00021082 NA coding upstream 225640 2402174 ~ 2412334 (-)
AMCG00021085 NA coding upstream 346326 2522860 ~ 2576954 (-)
AMCG00021086 NA coding upstream 406796 2583330 ~ 2583617 (-)
AMCG00021091 LOC106603306 coding upstream 1078845 3255379 ~ 3265211 (-)
G83355 NA non-coding downstream 10532 2144404 ~ 2147117 (-)
G83352 msn,LOC106567791,LOC102776036 non-coding downstream 15906 2140290 ~ 2141743 (-)
G83346 NA non-coding downstream 51251 2105064 ~ 2106398 (-)
G83343 NA non-coding downstream 71570 2083177 ~ 2086079 (-)
G83342 zc3h12b non-coding downstream 77635 2079669 ~ 2080014 (-)
G83371 NA non-coding upstream 14092 2190626 ~ 2190909 (-)
G83422 NA non-coding upstream 177453 2353987 ~ 2354694 (-)
G83441 NA non-coding upstream 334790 2511324 ~ 2511549 (-)
G83442 NA non-coding upstream 338956 2515490 ~ 2517126 (-)
G83465 NA non-coding upstream 423975 2600509 ~ 2602840 (-)
G83313 NA other downstream 179681 1973160 ~ 1977968 (-)
G83428 NA other upstream 280467 2457001 ~ 2459379 (-)
AMCG00021090 NA other upstream 501051 2677585 ~ 2718919 (-)
G83761 NA other upstream 2526721 4703255 ~ 4751235 (-)
G83864 NA other upstream 4367958 6544492 ~ 6546577 (-)
AMCG00021153 NA other upstream 4938886 7115420 ~ 7122491 (-)

Expression


Co-expression Network