AMCG00021103


Basic Information

Item Value
gene id AMCG00021103
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 3741481 ~ 3749096 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021103
GCGTGGCCTGTGGGAGCGGCGCGGTGCTCAGGAACACGCATGCGCAGCGCGGCGGCGGCTCCCGGCCTTTTCTCTGATTTTGACACAGCGGGTTTAACACGTGTGAGTGCACGATGGCAGGAGAGACGCTCTCTGACCCCGGGGACGAGCACAGGCGCGCCCTGGTGTACCGGCTCGTGCTGCTGCAGCAGGCACGGAGCTCCGTGGAGCGCGAGCTGAGGGCCTTCACGGAAACGGCCACCCGAGCGGTGCAGATCTTCCTGGACCGACCCGAGACAGGCGCGGCGCCGGACTGCCTGAGCATCTCCATTGGCCTGGAGGAGAGAGTCCTGGTCCTGCAGCAGCTCTCGGTCTTCTTCCAGGACCTGCGATCAGTTTCAGGCCCAGAAAGTTGCTCAGCATTGATCCCAAAGCGTCAGCCTCCCTTCCCTGCTCTTCGGGGCGCATCTGATGAGAGAGGCATCCTGAAGTTTGGACCCATGTTGAGAAACGTTCTGATGGCCACGTCGATCACGAATGCCGTTCAGACGCTAGGAGCCATGCTAGCGTTAGGGCAGATCCGAGGGCTCCTCACTCCTCACACGAAGATGGTGTCTTGCAGTACGTCCACGTACTTCAACCTCAAGAAGGAAGTGTTTACAACTCCTGGTTTCGAGAAGGAAAAGGTGCGAACCGAGAGGGCTGGCGGTCGTGTCGCACCACAGATGGTCGTGCCGTTGATGTCGGGCGAAAGCTCTCAGTCCGGGATCGGAGGCCCTTGTGCAATAATGACCAAGACCGTCAAGCCCAAGATGAGACGAGGACCAGCTTGTTTGTTAGACATACATTTGGGTAATGGTCTGGAAGTGAACCACCAAAAACAGACCTCGTCCCAGCTGATCTCTTTTCTCCGCACGTATTATGAAAGTGATCATGTGACTGGAGTGGATCTCTTTAAAGGAAACCCAGAAGCCCAAAGTGCTCTCCCGATGGAGGTGACGGTCGCACCGCTGGACTCGGTTGACCACCAGCGCACTTTGGAAAATGAGTTGTCAGCGGCAGATGGCTTGAAGCCGCAACGCCTGCCCTGCCTGGGATGCTGTGTGCCTGTCTTTAAGATCAGAAGGACCAGTAAGGACGGCGTGTCCATCTACAGATGCACAATCGCCACCAAATCTGAGTTGTGGGACATCTGTGATATCTGCATTGAGGAAGCTGCTCTTTCTAACTGCCTTTTGGAGCAAGACCTTCCACTTCCTGCAGAAACGCGCAGCGGTGGTCATGAGGAGCCTGAGGTCGCGCCAGGCTGTGGCGGCCCCAGGGGGCCACGGCTTTTGACTGCAGTCGAGGTCAAAGAGGCGGAAGTTGTTGATTCCACTCTGGGGAAGGAGGGCACCGGTGAGAAGAGTGATGGAGACGTCACAATCCCAGAATTCAAGATCCGGAAATTCGAGGAAATGGAGGTGACCGTCACCCATGTGGACAGCCCTGCGAGCTTCTTCATCCAGAGCGCTGGAGCTGAGCTGCAGGAACTGACTCGGAAGCTGAATCAGGACCGCAGCTCCTCCTGTGCGCGGATTAAATGCGTCCCTGATATCGGAGCCCACGTTGTCGGCTGGTTCCCCAGACAGCAGCTGTGGTGCCGGGGAGTTGTGCTCAAGATCTGTGGGATGCAAGGAGAGGTGGCGACGGGTCGGTCCCATGAGCGCCTGCACCGCGTCGAGGTGGAGGTGATGAGGATCGATTTCGGAGACGCTGCACGGCTGGTGCTGGTTGACCTGTGGGAGCTCAGCGCGGAGCTGGCCGCTGTCCCCAGGCAGGCTCTGTGCGTCTCGCTGGCAAACGTGTCCCCGCTCAGCGGAGGGCAGTGGACGTCGGAAGCGATCAGCTGGTTCAGAGAGAAGGTGGGAGGCCGGAAGCTCTACGCCCGCCTGTATCCCACAGACGGCGCCGTGAAGGCCGAGCTGAGAGGGGCTTCGGTTTCACTGCAACTGACTGAAAACGGCCACGCGACGCATGACCGCCTGAGGAGAGCCGCGCACGACGGTGGGCTGCTGTTACGAGCTGTGCAGTCCGTAGAATCCAAGGCCGACAGAACCGAGCGTCGGCGCAGTGGGAGAGACACATCCTGTCCCGTTTCTCTCGGCACAGAGACCCACCGACTTCCACCTTCTGTCTCGGCTGACGGTCTGTGTACGGCGCTGCGCAGAGACCCGGGATCAAAGGACACGGATCACAACCATCGCAGCTGGTTTGGCCTGGAATGGATTCAGCCTCCGCTCTTCTCGGTCCCTTGCTGA

Function

GO:

id name namespace
GO:0006260 DNA replication biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0006269 DNA replication, synthesis of RNA primer biological_process

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021103 True 2279 mRNA 0.59 10 3741481 3749096

Neighbor

gene id symbol gene type direction distance location
AMCG00021102 NA coding upstream 9763 3725004 ~ 3731718 (+)
AMCG00021100 LOC106568050,LOC106603405,LOC107548453 coding upstream 33185 3704169 ~ 3708296 (+)
AMCG00021099 NA coding upstream 51736 3686140 ~ 3689745 (+)
AMCG00021094 NA coding upstream 58605 3679213 ~ 3682876 (+)
AMCG00021098 NA coding upstream 65102 3675079 ~ 3676379 (+)
AMCG00021104 NA coding downstream 8048 3757144 ~ 3757692 (+)
AMCG00021106 NA coding downstream 9503 3758599 ~ 3760890 (+)
AMCG00021101 NA coding downstream 12985 3762081 ~ 3773308 (+)
AMCG00021108 nono coding downstream 55115 3804211 ~ 3809015 (+)
AMCG00021107 NA coding downstream 92504 3841600 ~ 3844289 (+)
G83528 NA non-coding upstream 387195 3353985 ~ 3354286 (+)
G83516 NA non-coding upstream 653572 3087694 ~ 3087909 (+)
G83497 NA non-coding upstream 803796 2937485 ~ 2937685 (+)
G83493 NA non-coding upstream 976477 2764793 ~ 2765004 (+)
G83459 NA non-coding upstream 1133811 2607269 ~ 2607670 (+)
G83621 NA non-coding downstream 39931 3789027 ~ 3789246 (+)
G83622 NA non-coding downstream 45893 3794989 ~ 3795242 (+)
G83623 NA non-coding downstream 46248 3795344 ~ 3795611 (+)
G83645 NA non-coding downstream 186600 3935696 ~ 3935955 (+)
G83704 NA non-coding downstream 512905 4262001 ~ 4265982 (+)
AMCG00021076 NA other upstream 1511334 2209482 ~ 2230147 (+)
AMCG00021063 NA other upstream 1822115 1917488 ~ 1919366 (+)
AMCG00021049 NA other upstream 2815006 918006 ~ 926475 (+)
G83624 NA other downstream 48745 3797841 ~ 3798783 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other downstream 377974 4127070 ~ 4129373 (+)
AMCG00021114 NA other downstream 453615 4202711 ~ 4233797 (+)
AMCG00021133 NA other downstream 2795138 6544234 ~ 6546601 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other downstream 3362901 7111997 ~ 7121237 (+)

Expression


Co-expression Network