AMCG00021105


Basic Information

Item Value
gene id AMCG00021105
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 3733756 ~ 3736353 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021105
AGAACCGTCACCCTGGGGCTCGATCTGTACCACACTCTGTTGAAAGATGCCTCTCTGAAGACCGAAAACATGGTGGCCTCCTCCCTCGGGGTGATGACTCTGGGTGCCAAGGACAGCACGGCCAGCCAGGTGAAGTCTCTTCTCAGCGCTGACCTCCATGAGGACACGCTCCACCCGGCCTTCTCCGAGCTGCTGGGCGAGGTGACCAACGAGACGACCTGGAAGATGGGCAGCCGCGTTTACGCCTCCGCCCGTCTGAGTCAGCAGTTTGTGGAGAAAAGCAAGAAGCACTACCGGCACGATCACTCCGAGATCGACTTCAGGGACAAGAGCAAAGCCCTGGAGTCCATCAACCAGTGGGCGTCTGAAAACACAGCAGGCCGAGTGACTGAGGTCACCAGGAACCTGCCAGGGGCTGATGGGGCCATGTTTGTCAATGCCGTGTACTTCAAACCCCATTGGGGGGAAGCCTTCCACCACGCCATGGTAGATAAGAGAGGCTTCCTGATATCTAAGAGGCAGTCGGTGTCGGTGCCGATGATGCATCGCACAGTTTTCTATAAATACTACGAGGACGAGGCCAACCAGCTGCAGGTTGTGGAGATGCCCCTGGGCCTCAAACAGACCAGCATGCTGATCATCATGCCTTTCCACGTGGAGCCCCTGGACAGGCTGGAGAAGATGCTCTCCAAGGAGCAGCTCAGCGCTTGGTCCACCTGCATGCAGGAGAAAGCAGTGGCTGTGTCGCTGCCCAGAGTGACTGTGGACAAACACCTGAAGGAGCTGGGTCTGGCTGAAGCCGTGGATAAAACCAAGGCAGACTTCTCTGGCTTTACCGGACGGAGAGACCTGCATCTCTCTGCCTTCCTCCACACCGCTGCCCTGGAGCTGGACACCGAGGGCAACCCCTTCGACGAACAGATCTACGGCCGACAGGAGCTGAAGTCCCCCAACCTGTTCTACGCCGACCACCCTTTCATtttcctggtgcaggacaagaAGAGCGGCTCCATCCTCCTCATCGGCAGGATCGTCAAGCCCAGCGGCGACGGGAATCATGACGAGTTATAG

Function

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005737 cytoplasm cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021105 True 1071 mRNA 0.58 4 3733756 3736353

Neighbor

gene id symbol gene type direction distance location
AMCG00021092 efnb1,LOC106603306,LOC106567780 coding downstream 445016 3287994 ~ 3288740 (-)
AMCG00021091 LOC106603306 coding downstream 468545 3255379 ~ 3265211 (-)
AMCG00021086 NA coding downstream 1150139 2583330 ~ 2583617 (-)
AMCG00021085 NA coding downstream 1156802 2522860 ~ 2576954 (-)
AMCG00021082 NA coding downstream 1321422 2402174 ~ 2412334 (-)
AMCG00021110 NA coding upstream 43468 3779821 ~ 3801007 (-)
AMCG00021111 NA coding upstream 74058 3810411 ~ 3813043 (-)
AMCG00021109 NA coding upstream 80340 3816693 ~ 3825283 (-)
AMCG00021115 LOC106567772,LOC106603301 coding upstream 500684 4237037 ~ 4260026 (-)
AMCG00021116 NA coding upstream 525676 4262029 ~ 4281357 (-)
G83596 NA non-coding downstream 15566 3710153 ~ 3718190 (-)
G83539 NA non-coding downstream 311310 3422202 ~ 3422446 (-)
G83517 NA non-coding downstream 645801 3087694 ~ 3087955 (-)
G83512 NA non-coding downstream 677604 3036297 ~ 3056152 (-)
G83499 NA non-coding downstream 779143 2941583 ~ 2954613 (-)
G83607 NA non-coding upstream 10805 3747158 ~ 3747512 (-)
G83608 NA non-coding upstream 12305 3748658 ~ 3750902 (-)
G83667 NA non-coding upstream 384896 4121249 ~ 4121486 (-)
G83673 NA non-coding upstream 389138 4125491 ~ 4125701 (-)
G83764 NA non-coding upstream 1002743 4739096 ~ 4739884 (-)
AMCG00021090 NA other downstream 1014837 2677585 ~ 2718919 (-)
G83428 NA other downstream 1274377 2457001 ~ 2459379 (-)
G83313 NA other downstream 1755788 1973160 ~ 1977968 (-)
G83761 NA other upstream 966902 4703255 ~ 4751235 (-)
G83864 NA other upstream 2808139 6544492 ~ 6546577 (-)
AMCG00021153 NA other upstream 3379067 7115420 ~ 7122491 (-)
AMCG00021249 NA other upstream 8357124 12093477 ~ 12100854 (-)
G84814 NA other upstream 8790740 12527093 ~ 12527694 (-)

Expression


Co-expression Network