AMCG00021123


Basic Information

Item Value
gene id AMCG00021123
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 4752179 ~ 4760646 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021123
gtgtttatttgtataattgtaaTAAGACCAGATGTACTGTACACTTGCCTTTAAAATTCGCATAGAAAAGTGTATGGTCATTGCCAAGCATGATGGCACAAAGCCTGCAGATTTGATTTAGACAGGAGCAGCAGCATCTGCATTAGCAATCCCAGAGCTGCAGCTGGCCCTGGTGCAGGCGTGCACGAAAAGTTTTTAACCCGAATAATGCCAGGCTGCTGTTAATAACACGGCTGCATTTTCATACATGCACATGTAAGTTTACAATACATCGAAAAACGCTTAAACtggaagaatttaaaaaatgatacaaaaagcacttgttttgtAACAGTTTTAAGACCTGTCCAATGAGAGCCGCTGACGGGGGTCACATGGTGCCGTTTATGTAACACTTTTTCTGCTCCGGATCAGTACCTCAAGCGCAGCGATGGGTGTTCGCGGTGCGTGTGACCAGGGCAGGAGGCGAGGTGTGGACAAAATGACACCAGCACAGTTATGTCTTAATAAACTCTTATCCCCAGACCAGCACCAATGAGCTCCATCCCCGCAGCGCCGCTGGCCGCTCAGGACACGGAGAGCATGGACAGCCGGGCCATGCTGGAGCTGGCGGCTGAAGCCTTTCGGGCTGGAAACTTCGAGCTGGCCGCCGACATCTACGAGTGCCAACTGCGGGACTCGGGCGAGCACGGCGCCCCGCAGGAGCTGCTGCTGAAGCGGGCGGACGCGCTGGCGTGCGGGGGGCGGCTGTGCGACGCCTTCGAGGTGTACCAGCAGGCGTCCCGGCTGGAGCGGCTGCGCCCGGGGCAGCTGGACAGCCTCATCGAGTGTCTCATCGGCAGCATCCGGAGTAAAGAGGGGCTCGCCAGCCCCATGTGCGTCCAGGAGCCCGGCGCTTTCGAGGCTTTCACCTGCCGGATCTGCTTCGGATTCCTGTACGAGCCCGTCACCCTGCCTTGCGGACACTCGTTTTGCAGAAAGTGCCTGGACCGGGAGAGGACGCCCGTGTGCTGCCGACACTGCGGGGACAGCGCGAAACTCGCCGACATCCAGAGCTACAGAGTCAACGTCATCCTCAGCAACCTGCTGTCCAAGTGGTTCCCCGCCCAGCAGCGCGCCGTGCGGCTGCGGCAGGAGGGCAACGCGCTGTACGCGGAGAAGCGAGTGGAGGGCGCCTGGGAGAAATACAGCGAGGCGGTACAGCTGGCTCCCAGGGACCATGTGCTGTTCAGCAATCGTTCACAGATCAACTCCAGTCTAGGAAACTTTGAAGAGGCGCTGAGCGATGCAGAGATGGCGTGCAGGCTTCAGCCTCTTTGGTTAAAGGGACGTTTAAGAAAAGCACAAGTTCTGGCCACTCTTAGGAAAACGGAAGAAGCTTTAACTGAGTACTTGTTCTGCATTGCTCTGGACCCAGAAAGCAAATTGGCAAAATCTGAAGCTCAAAAGCTGTTGAGTGATCTGTTTGCTCCAGTGCCGGATAACGTCCAGGAGAGAATCCCCAACTGCATCAGCCTGCTGTCCGGCCGAATGAGATTAAAGGGAAATGCACTGAACACTTTGAGTTTAAACGGTAGACCCAGCACCCCGAGGCTGTGTAAGGAAAGTATGAAGAGTAATAACAGCATAGCCCAACAGGAGAAATCGAAGTCAACTCTATCTGTCTGTCCCAGGAAAGCATCCGATGCAACGACCCAGAGGTTTCCATGTTCTGAAGACAAAGGCAACAGCAAAGACTTTTCCAAAACCTGCCACCCGACTGTCATTGACAGGCGCTGCCTTCTCAAACGGAAACACAGCTCAGAAGATGAAGACAAGGCAGAAAACATCGAAGAGTTGTGCAAACACGTGAAATCAGAAGCCGTGCTGAAGGAGACGTCGGCCCCCTGGTGCTCGGTGGTCCGGGACCTGATCGATGCCGGTGACCTGGAGTGCTCTCTGTGCATGAGACTGTTCTACGAGCCGGTCACGACTCCCTGCGGTCACACGTTTTGTCTGAAGTGTTTAGAGAGGTGTCTGGACCACAATGCGAAGTGTGCTCTCTGCAAGGAGGAACTTTCAGAGTACCTGGCCCAGAGGCAATACAGCAAAACCGTTCTGATGGAAGACCTCATCGCTAACTACCTGCCAGAGGAGCTtgtggaaagaagaaaaatctatgaAGAAGAAATGGCAGAGCTATCCAATTTGAATATCAATGTGCCTATATTTGTGTGCACCATGGCCTTCCCCACCGTTCCCTGCCCTCTGCACATCTTTGAGCCCTGCTACCGGCTCATGGTTCGGAGGTGCATCGAGACTGGCACCAAGCAGTTCGGCATGTGCATCAGCGACTCCGTCAAAGGGTTTGCGGATTACGGCTGCATGCTGGAGATCAGGAACGTGGAGTTCTTTGCGGATGGACGCTCTGTCGTCGACACGATTGGGAAGCGGCGCTTTAAAGTGCTGCAGCACAGCCAGCGTGACGGATACAACACCGCCGACATCGAGTATCTGGAAGACAAGAAGGCCTTAACTTGGATCAACTCCCTCAAGTCCGAGCAGAAGGAGAGGATCTTGGGGCATTTTGGACCCATGCCACAGAAGGAGCCCGAGCCACAGGTCAGTCCCAACGGGCCCTCGTGGTGCTGGTGGCTCCTCGCCGTCCTGCCCTTGGAAGGGAGAGCCCAGCTGCCGTTCCTGGCCCTGACGTCCCTCAGAGACCGACTCACAGGCATCCGCAGGGTCCTGCTGTTCATGTCCCACAACCGCTCCCGGTGACCGACCGTCCGCCTGCACTCGCTTGTTTTTAAGACCAAACTATAAATAgccttttttgtaataaaagaagaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021123 True 2843 mRNA 0.54 12 4752179 4760646

Neighbor

gene id symbol gene type direction distance location
AMCG00021124 NA coding upstream 552 4739141 ~ 4751627 (+)
AMCG00021112 gpr50,LOC104936099,LOC108436701 coding upstream 836535 3906153 ~ 3915644 (+)
AMCG00021107 NA coding upstream 907890 3841600 ~ 3844289 (+)
AMCG00021108 nono coding upstream 943164 3804211 ~ 3809015 (+)
AMCG00021101 NA coding upstream 978871 3762081 ~ 3773308 (+)
AMCG00021126 tsc22d3,zgc:64189,LOC107757743,LOC107666597,LOC107561288,LOC107562102 coding downstream 84105 4844751 ~ 4848172 (+)
AMCG00021127 tsc22d3,LOC108246678,LOC105928685,LOC107377168 coding downstream 130603 4891249 ~ 4894563 (+)
AMCG00021128 pcdh11,LOC107741043,LOC107661995,LOC108417465 coding downstream 1008521 5769167 ~ 5787583 (+)
AMCG00021129 LOC107664771,LOC101066135 coding downstream 1121270 5881916 ~ 5882834 (+)
AMCG00021130 NA coding downstream 1205842 5966488 ~ 5970373 (+)
G83741 NA non-coding upstream 21235 4634736 ~ 4730944 (+)
G83716 NA non-coding upstream 459815 4292126 ~ 4292364 (+)
G83710 NA non-coding upstream 465579 4280108 ~ 4286600 (+)
G83704 NA non-coding upstream 486197 4262001 ~ 4265982 (+)
G83645 NA non-coding upstream 816224 3935696 ~ 3935955 (+)
G83752 NA non-coding downstream 57451 4818097 ~ 4818329 (+)
G83900 NA non-coding downstream 1882536 6643182 ~ 6643523 (+)
G83904 NA non-coding downstream 1900083 6660729 ~ 6662819 (+)
G83914 NA non-coding downstream 1918557 6679203 ~ 6681917 (+)
G83976 NA non-coding downstream 2290551 7051197 ~ 7056132 (+)
AMCG00021114 NA other upstream 518382 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 622806 4127070 ~ 4129373 (+)
G83624 NA other upstream 953396 3797841 ~ 3798783 (+)
AMCG00021076 NA other upstream 2522032 2209482 ~ 2230147 (+)
AMCG00021063 NA other upstream 2832813 1917488 ~ 1919366 (+)
AMCG00021133 NA other downstream 1783588 6544234 ~ 6546601 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other downstream 2351351 7111997 ~ 7121237 (+)
AMCG00021180 NA other downstream 3279524 8040170 ~ 8043299 (+)
G84301 NA other downstream 3871081 8631727 ~ 8633410 (+)
G84425 NA other downstream 4655621 9416267 ~ 9423419 (+)

Expression


Co-expression Network