AMCG00021138 (LOC103395702,LOC102211599,LOC101478708,LOC102313148,LOC105902075)


Basic Information

Item Value
gene id AMCG00021138
gene name LOC103395702,LOC102211599,LOC101478708,LOC102313148,LOC105902075
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 6586140 ~ 6615644 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021138
ATGGCTGCTGTGGAGGAGTGGACAGCCCAAGATGTGGCTGACTGGATCAATCACATCGGCTTGCCGGCACATTCTCTGAGCTTCCTAGacaATGCTGTCACAGGATTGGATCTTTTGGAAATCAGCGACTCCATTTTAGCTCCGTGCGAGAAGTTCGCTCAAGTTTTTGCAGTTGGGTTGAGATCGGAGAAGAGCAGGATCCGCTTTATTGGGGAAAActctgtgCCTTCTGCTGAGTGGCTGGGCGTGAGGGACATAGCTGACCGGCTGCACATTCTCGAGCGGCTGCAGGACGTTCTGGAGCGGCAGGAGACGCAGGACTTTCCGCCCCTGCGCCATGAGCTGCTGTCTGTGATCCGAGAGACTTCCGAGTACACCGAGACAGGGAGCATCGAACGTGGCAGAAGCTCTTCCTTCCACGAGGTCCGCGGCCTGCGGGAGATTGACATGAGGGCCGCGGAGGACGcatccagcagcagcagcaacagcagcaacaacgtCTTGCAGCGCCTCCTCCAGGAGCAACTCCGCTATGGCAACCCTGGGGGGGACAGGAACTACTTGGCtctgcagcagcaacagcagcagcagcagcagcagcaagggCCTGTGAGTGGGGTTCCCTACGGCGGAGCTGGAAACCCAGGCGAAGACCATCCCATGGTCCCTCACATCGCCAGGCAGGAGCCGCAGGGCCAGGAGTTGCAGGTTGACTCTGGCATGGAGAAGCAGCTCGTTTCTcgtggaggagggggagggggaggaggaggcggacAGGGACAAGGCCCCAGTGCCGAGGAGCTGCCTACCTATGAGGAAGCCAAGGTCCAGTCACAGTATTTCAGAGGGCAGCAGCAGATGCCGCAAACAGTCGGTGCTGCCTTTTATGTGACTGGGGTGACCAATCAGAAGGTGCGGACGGAGGGGCGGCCCACAGTGCAGCGGGTGAGTGCGGGCAAGGTGCACCAGGACGAAGGCCTGAAGGACCTGAAGCAGGGCCATGTGCGCTCTCTCAGTGAGCGTCTCATGCAGCTGTCCCTGGCCACGAGCGGAGTGAAGGCCCACGCTCCGGTCACCAGtgcccccctctccccacaGCCTCCTGGCCCCCCAGGAGACTTCTACAAACCCAGTGTCCAGCATAGGGGGCCACCCCCAGACTACCCCTTCAAGAACATGGCCAGTCCGCCCAAGCAACAGGAGCCCGGTCACTACTATTCTGACCACCGGCCGGGCCAGCAGGGCAGGGCTGACATGCCTCACGTCAGGTACCAGCCTCCCCCTGACTACGGGGCCCTCAGGCAAAATCAAGAGAACTTGGGGCATCCTCAGAGGATGCACCACCACAGCCCCACGTCCTCCGTGACCTCTGTGGGCTCTGTCTCTCTGGCACAGTCCTCCAACCTGGGCAGCATGATGGGGTCGCCTTACCCTTCCTCTCAGTCCTCTCACCCGGGGGAGACTTTCTCTTTCGTGCCCCGCAGCGCACAAGGGCCCGGCTCGCACCACGGGGACCCCTTCAGCCTGTCCTCCCTGCCTCCTCAGCGTGGTCCACCCTTCCAGGGAGACCCTTATATGTCGTCTCCTCGATCACAGCAGCATTTCCATCACAGCCACTCCTTCCAGGGAGATCCCTACGCCATGGTGTCCCGAGCCCAGCAGATGGTGGAGATGCTGTCGGATGAGAACCGCATGCTGAAGCAGGAGCTGGAGATGTGCTGTGAGAAAGTGGCCAAGCTGCAGAAGCTGGAGACGGAGATACAGCGCGTTTCAGAGGCCTACGAGAACCTGGCCAAGTCCTCCTCCAAGAGAGAATCACTGGAGAAAACCATGAGGAACAAACTGGAGCTGGAGATCCGCAGACTGCACGACTTCAACAGAGACTTGAGGGAGCGCATGGAAACAGCCAATAAGCAGCTGGCTGCTAAAGAATATGAGGGATCAGAAGACAACCGAAAGACCATCTCCCAACTCCTGGCTCAGAACAAGGAGACcatgagggagaaagagaagctGGAGATTGAACTGAACTCTCTCCGCTCCGCTAATGAAGACCAGCGGAGGCATATTGAAATCCGGGACCAGGCTTTGAACAACGCGCAGGCCAAGGTGGTCAAGCTAGAGGAGGAGCTGAAGAAGAAGCAGGTCTATGTGGAGAAAGTGGAGCGCATGCAGCAGGCGCTAGCCCAGCTCCAGGCCGCCTGTGAGAAGAGGGAGCAGCTGGAACACCGCCTCCGAACCCGGCTCGAGAGGGAGCTGGAGTCCCTGCGAACGCAACACCGGCAGGGCAGCTCTCAGAACAGCAACACGCCAGAGTACAACGCCACGGCGCTGATGGAGCACCTGCGCGAGAAGGAGGAGCGGATTCTGGCCCTGGAGGCTGACATGACCAAGTGGGAGCAGAAGTATTTGGAGGAGAGCGTCATGAGGCAGTTTGCTCTAGACGCTGCAGCCTCTGTCGCCACCCAGAGGGACACCTCCTCTGGGATCAGTCACTCTCCCTCCTGCAGTTATGACACCTCAGTCGAAGCCCGGATacagaaggaagaggaggagattCTCATGGCCAACCGCAGATGCCTGGATATGGAAAGCAGGATCAAGAACCTCCACGCACAGATCATTGAGAAGGACGCCATGATTAAGGTGCTTCAGCAGCGGTCACGGAAAGAGCCCAACAAATCAGAGACGTCTTCCACAATGAGGCCATCCAAGTCCCTGATGTCCATCGCCAACACGGGCAGCTCTAGTctgctctctcactccctcGCCCTCAGCAGCAGCCCCATCGCAGAGGAGAAGAAGGATGACCGGAGCTGGAAGGGGAGCTTGGGAGTCCTGCTTGGACCAGAGTTCCGGGCCGAATCCCTGCGGAATGAATCCATCTCCTCCTCGCCCTCTCCCGTCTTGCCCTCCACGCCCATGATGTCAGGGCACTCTAAGAGCGGCAGTCGCGACAGCAGCACCCAGACGGACAAAGGCAACGAAGCCAGCAAGCCCACAACCCCAGCGCTGCCGATGGTGCAGCAGCGATTGACCTGCCCCAGCCCTGTCTATATCCCAGACAGGATAGCAGATATGCCAGTCTTCCACAGCAGCACTTTGGAGAGAAGAGTGCCAGTCCAGTCGCCCACACAGGATGTGGATAATGAAATGGTGGAAATCCTCATTTAAACATGGATGTGTTTATATAGTAgcccttctctctctgcctggcCAAGAAGAactttttacaataaaaaaaaactaatgtatGTACAGTAAATAGACATGGAAAACCTCCAAAACAGGTGAAGGATCGTTGttcagttgtatttgttttgtttaaagagCTAGCTGGCTCAGAATGAGGGTATGTTTAAATGCACTAATTTTaagcattattttcatttaaaaaagacaagcTTGTACAGTTAGTGAGCAATAGATTTTCATTTACACTGATTGGTGAATGCTATTGTATAGTATTGATGTGGGCTTTTTAACAAGCCTGGTGGACCAAATGTGTTTGCTacccttttttttaatctattgcactactttatatatatttttacattttttgtatttctcctaTTTTCTACAAACATTTGTAGCTTTAGTATCAATCTATTTATGAGAAGATCCTATTTCCAGTTATTACACTTGGCACTTGGGCagcaaacattaattttgtagatggggggcag

Function

NR:

description
PREDICTED: angiomotin

GO: NA

KEGG:

id description
K16819 AMOT; angiomotin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021138 True 3689 mRNA 0.55 16 6586140 6615644

Neighbor

gene id symbol gene type direction distance location
AMCG00021139 pgk1 coding upstream 2939 6573176 ~ 6583201 (+)
AMCG00021131 NA coding upstream 13755 6549111 ~ 6572385 (+)
AMCG00021132 pgrmc1,LOC107726794,LOC107713219,LOC107697348 coding upstream 52825 6530980 ~ 6533315 (+)
AMCG00021130 NA coding upstream 615767 5966488 ~ 5970373 (+)
AMCG00021129 LOC107664771,LOC101066135 coding upstream 703306 5881916 ~ 5882834 (+)
AMCG00021137 NA coding downstream 22077 6637721 ~ 6643062 (+)
AMCG00021140 dcx coding downstream 101314 6716958 ~ 6724763 (+)
AMCG00021142 NA coding downstream 173491 6789135 ~ 6811229 (+)
AMCG00021143 kif4a coding downstream 278359 6894003 ~ 6910414 (+)
AMCG00021144 NA coding downstream 300173 6915817 ~ 6924589 (+)
G83752 NA non-coding upstream 1767811 4818097 ~ 4818329 (+)
G83741 NA non-coding upstream 1855196 4634736 ~ 4730944 (+)
G83716 NA non-coding upstream 2293776 4292126 ~ 4292364 (+)
G83710 NA non-coding upstream 2299540 4280108 ~ 4286600 (+)
G83704 NA non-coding upstream 2320158 4262001 ~ 4265982 (+)
G83900 NA non-coding downstream 27538 6643182 ~ 6643523 (+)
G83904 NA non-coding downstream 45085 6660729 ~ 6662819 (+)
G83914 NA non-coding downstream 63559 6679203 ~ 6681917 (+)
G83976 NA non-coding downstream 435553 7051197 ~ 7056132 (+)
G83983 NA non-coding downstream 469574 7085218 ~ 7088239 (+)
AMCG00021133 NA other upstream 39539 6544234 ~ 6546601 (+)
AMCG00021114 NA other upstream 2352343 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 2456767 4127070 ~ 4129373 (+)
G83624 NA other upstream 2787357 3797841 ~ 3798783 (+)
AMCG00021076 NA other upstream 4355993 2209482 ~ 2230147 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other downstream 496353 7111997 ~ 7121237 (+)
AMCG00021180 NA other downstream 1424526 8040170 ~ 8043299 (+)
G84301 NA other downstream 2016083 8631727 ~ 8633410 (+)
G84425 NA other downstream 2800623 9416267 ~ 9423419 (+)
AMCG00021240 LOC107742636 other downstream 3854419 10470063 ~ 10719327 (+)

Expression


Co-expression Network