AMCG00021151


Basic Information

Item Value
gene id AMCG00021151
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 7128663 ~ 7146664 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021151
CATCACCATATTGTCCCAGTATGCGCTGACGGAGGAGATTAGCCCCTCCTTTCCAGGGGCAGCACTCACGCTCACTGAGCCGCTGGAAAACAGCACAACATAACACAGCTCGGCTCAAACCTGTAGGCTTCACTGCAGCTCTcacaacagcacacacagacatggacAAGAAGCAGAAACCAGAAACTGAGAAGAAAGATGTCATCATCATCGGCGGAGGTTTATCTGGTCTTAGTGCTGCTAAGCTGCTGAGGGAGTTTGGGCTGAATGTCGTGCTTCTGGAAGCAAGAGCGCGCGTGGGCGGCAGAACGTTCACTGTGAAGGGTCCGCAGTTCCAGTATGTGGACTTAGGAGGTGCCTACATTGGCCCGACCCAAAGTGGCATTTTAAGACTGGCTAAAGAACTGGGGGTGAAGACGTACTTGGTCAACGAGAGAGAGCAGCTAATTCATTACACTAAGGGTCAGTCACATCCGTTCAGAGGTCCGTTTCCCCCCACATGGAATCCCATCGCTTACCTGGATTACAACAACCTCTGGAGGACTCTGGATCACATGGGGAAAGAGATCCCAGCTGAAGCCCCCTGGACTGCCCCGCATGCCACGCAGTGGGACAATATGTCAATGAAAGAACTTATAGACAAAATTTGCTGGACAAGGACTGCCAGAAACTTTGCCACACTCTTTGTGAACGTGAACGTGACCTCCGAACCATATGAAGTCTCTGCTCTGTGGTTCCTCTGGTATGTGAAGCAGTGTGGAGGAACGAGGAGGATATTCTCAACATCTAATGGAGGACAGgAAAGAAAATTCATTGGGGGATCAGGACAGATCAGTGAAAGAATCGCCAAAGACCTGAAGGACAGTGTGCAACTGAACCAGCCTGTGATTAAGATCTCTCAGACTGATACAGGAGTTGGTGTTGAGACATTAAGTAAAGATAATTATGAGGCTGCCTATGCTATCACTGCAATCCCTCCAGGGTTAACTATGAATATGCACTATGATCCCGAGCTGCCGCCAGTGAGAAATCAAATGATCCAAAGGGTTCCCATGGGCTCCATCATTAAATGCATGATGTACTACAAGACAACGTTCTGGAGAGAGAAGGGTTACTGTGGAACAATGATGATTGAAGATGAAGACTCTCCCATTTCAATGACTCTTGATGACACTAAACCCGATGGATCATGTCCTTGTATTATGGgGTTCATTTTGGCAAGAAAAGCAAGACATCTCATTCATTTGAGCAAAGATGAGAGGCAGCAGCGTATCTGTCAGATTTATGCAAAAGTGCTGGGCACAAAAGAAGCGCTGCATCCTGTTCACTATGAAGAAAAAGACTGGTGTGGAGAACAGTATTCAGGAGGATGCTATACGGCTTATTTTCCCCCAGGAACCTTCTGTCAGTTCAGCAGAGTTCTGAGAGAGCCCTTCGGCAGGCTTTTCTTTGCGGGCACGGAGACGGCAACCAAATGGAGCGGCTATATGGATGGGGCTGTCCAGGCCGGAGAGAGGGCAGCCAGAGAGGTGCTACATGCGATGGGTAAGATTTCCCAATCAGAAATCTGGACTGAGGATGCAGACTCCCAGGAGATACCAGCTCTGCCAGTCACAGAGAGCTTGATTGAGCAGTATCTGCCCTCTGTTCCTATGTTCCTGACCATGGCCGGAGTCACTATTCTGTTCATGACGGCAGCCACAGCCCTGGGAATGGGCGCATTTAACACGAATTCACGGCTACGCCTATTCCattgattttggttttgtgttcattaattttattgtaaaatcatCTAGTTTATTAGGGCTCAATCTCTGTGTTTTCATACTGAATAATTCTGCCATTTTGCCAGGGAGACTACTACTTACAGCCAAAGAAATCAATCCCACGCTTTAATGGTGTAGGATACTGCACACAGATAACCATTTGTGGAATTCTTTCTTAAATCGAAATTTGCGGCAGATTAGAACCTAATTACATCATCCCGAAAAGGTGTATCGTAAGCAATTAATCAAATGCACCCTCTTGCTCACCACATGACTGGTCTACCATATGTTATTGAGTTTGCAATTGAAGTTGCTGTGCTCAGAGAGTCTTCTTcattatcttaaaataattttaacaaatgtaatgtagGTCATTATGTCAACATGCGACTACTGGGCTCCAGCACTACCATAGTTAAGAgtataagaaaaatattattgGGAGGGGAAAAATTGAAGATTACCATAAAACTGCATTAATAAGATATTTAACTCActattgtagttaattcagtgCATGTTGTATGCATTGATTCCAATCACACCAAGTAATGTGTTaaacaaagtgaaaagaaaGCTTTGTACTGCAGTGACTCAATTACACCCaaagaaacaatatttattcataaactCTCTTTGATATTCCATCCAAACttgcttttttcatttcatgatCAATACTTCTAATTCCTAtggtaattgattttttttatttcagtgttgtaGCACAAATTGTGGATTACTGTATTGATATTTCAGTGGCAGCAAGAGGAAGGCACTTAGTtgcattttcttcttcagtctcacagaaataagaaaatagtgCAGTTAAATGTGGTTAAATATTGTTTGTGGAATGTGCGTTTCTAAATCAAGGTTGTGTATGCTGTAGAAGTAATGCAGGCATCTTCACGGTATTTAGTTTTCCTAGCAAGGAACTGAAACTTGAAAACCAAGTAGGTGTTATTAAGGTACATATAAAAGTATTGTCCTGTGTAATACATGATATGACATTTGTAGCTGTAGAACGTCTAATGCTGGTTGGAATCCGACAAAGTGTTTCTGTGTCTTAATTGGGGAAATTCATTGGCTTGTATTTCAATTactgtattgtttctttatcaactattaaatggaaaaatgttaCACAGATTGATGGCA

Function

GO:

id name namespace
GO:0042402 cellular biogenic amine catabolic process biological_process
GO:0042135 neurotransmitter catabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0008131 primary amine oxidase activity molecular_function

KEGG:

id description
K00274 MAO, aofH; monoamine oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021151 True 2930 mRNA 0.43 15 7128663 7146664

Neighbor

gene id symbol gene type direction distance location
AMCG00021149 brcc3,LOC107661795,LOC107582010,LOC107569767 coding upstream 606 7122574 ~ 7128057 (+)
AMCG00021148 ammecr1,LOC108429437,LOC107713167,LOC107715796 coding upstream 87812 7026401 ~ 7040851 (+)
AMCG00021147 ammecr1,LOC106563512 coding upstream 136675 6979040 ~ 6991988 (+)
AMCG00021146 NA coding upstream 171100 6956712 ~ 6957563 (+)
AMCG00021144 NA coding upstream 204074 6915817 ~ 6924589 (+)
AMCG00021158 gabrb4,LOC107571379,LOC107713123,LOC108429394,LOC107581896,LOC107661713,LOC103032374,LOC103367791 coding downstream 213696 7360360 ~ 7390841 (+)
AMCG00021160 NA coding downstream 257488 7404152 ~ 7420194 (+)
AMCG00021163 NA coding downstream 277999 7424663 ~ 7430404 (+)
AMCG00021164 NA coding downstream 283765 7430429 ~ 7436018 (+)
AMCG00021159 NA coding downstream 302454 7449118 ~ 7471974 (+)
G83983 NA non-coding upstream 40424 7085218 ~ 7088239 (+)
G83976 NA non-coding upstream 72531 7051197 ~ 7056132 (+)
G83914 NA non-coding upstream 446746 6679203 ~ 6681917 (+)
G83904 NA non-coding upstream 465844 6660729 ~ 6662819 (+)
G83900 NA non-coding upstream 485140 6643182 ~ 6643523 (+)
G84049 NA non-coding downstream 250396 7397060 ~ 7398518 (+)
G84061 NA non-coding downstream 279267 7425931 ~ 7426347 (+)
G84078 NA non-coding downstream 364705 7511369 ~ 7511988 (+)
G84090 NA non-coding downstream 406956 7553620 ~ 7560120 (+)
G84095 NA non-coding downstream 510529 7657193 ~ 7700683 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other upstream 7426 7111997 ~ 7121237 (+)
AMCG00021133 NA other upstream 582062 6544234 ~ 6546601 (+)
AMCG00021114 NA other upstream 2894866 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 2999290 4127070 ~ 4129373 (+)
G83624 NA other upstream 3329880 3797841 ~ 3798783 (+)
AMCG00021180 NA other downstream 893506 8040170 ~ 8043299 (+)
G84301 NA other downstream 1485063 8631727 ~ 8633410 (+)
G84425 NA other downstream 2269603 9416267 ~ 9423419 (+)
AMCG00021240 LOC107742636 other downstream 3323399 10470063 ~ 10719327 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other downstream 3816484 10963148 ~ 10987174 (+)

Expression


Co-expression Network