AMCG00021154 (LOC106563513)


Basic Information

Item Value
gene id AMCG00021154
gene name LOC106563513
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 7052536 ~ 7063256 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021154
ATGCCCTTTGCCTTCCTGTCGCCCGTGTCCAGGTTGCAGGTTCACATGCTGAATGGAGCCCTGCTGGCCCTGCTCTTCCCAGTTGTCAACACCAGGCTGCTTCCCTTTGAGATGGAGGTGTACTACATCCAGCACATCATGCTGTACCTGGTGCCTATTTATCTGTTCAGGAAAGGAGGAATTTACAAGCCGGAGCCGGCGGGTGATTTCTGGTGGGCCCTTCTGGCCACAGGGATCCTGTTCTTCTATCACTTCACCTTCCTGCAGGCCCTGGGACTGGTGACGGAGGTGAACCTGAACAACATGTTGTGCCCGGCGGTGTCGGACCCGTTTTATGGGCCTTGGTACCGGGTGTGGGCCACGGGCCATCAGACGCTGCTGACGATGTCCCACGGGAAACTGCTCGCCCTCCTGTTCTACACCGCCGTCCCCAACTACAAGTACATTCTGGATCTGGTCAGACTGCGGACGAAGAAAATAGACTGA

Function

NR:

description
PREDICTED: transmembrane protein 164-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021154 True 486 mRNA 0.57 4 7052536 7063256

Neighbor

gene id symbol gene type direction distance location
AMCG00021145 pak3,LOC106563430 coding downstream 208014 6815935 ~ 6844522 (-)
AMCG00021141 tmm47,LOC105912477,LOC105030438,LOC106603112,LOC107662487,LOC103353305,LOC101483903 coding downstream 382324 6659537 ~ 6670212 (-)
AMCG00021135 NA coding downstream 510234 6538542 ~ 6542302 (-)
AMCG00021136 NA coding downstream 602364 6449423 ~ 6450172 (-)
AMCG00021134 LOC100697681,LOC101472898,LOC102787112,LOC102308013,LOC102213142 coding downstream 630798 6397628 ~ 6421738 (-)
AMCG00021152 tmem164,LOC102783906 coding upstream 15922 7079178 ~ 7079639 (-)
AMCG00021155 NA coding upstream 24745 7088001 ~ 7101704 (-)
AMCG00021156 LOC102292396,LOC102784372 coding upstream 142165 7205421 ~ 7222849 (-)
AMCG00021157 NA coding upstream 160210 7223466 ~ 7325452 (-)
AMCG00021161 NA coding upstream 376776 7440032 ~ 7441027 (-)
G83931 NA non-coding downstream 239102 6812232 ~ 6813434 (-)
G83901 NA non-coding downstream 409013 6643222 ~ 6643523 (-)
G83862 NA non-coding downstream 415629 6569179 ~ 6636907 (-)
G83878 NA non-coding downstream 472117 6578854 ~ 6580419 (-)
G83860 pgrmc1 non-coding downstream 521263 6530936 ~ 6531273 (-)
G84052 gabrb4,LOC108429394,LOC103032374,LOC107727281,LOC107571379 non-coding upstream 327366 7390622 ~ 7390915 (-)
G84053 NA non-coding upstream 327808 7391064 ~ 7392433 (-)
G84081 NA non-coding upstream 399472 7462728 ~ 7469428 (-)
G84089 LOC107575789 non-coding upstream 448305 7511561 ~ 7511989 (-)
G84093 NA non-coding upstream 490364 7553620 ~ 7644000 (-)
G83864 NA other downstream 505959 6544492 ~ 6546577 (-)
G83761 NA other downstream 2301301 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 4333617 2677585 ~ 2718919 (-)
G83428 NA other downstream 4593157 2457001 ~ 2459379 (-)
G83313 NA other downstream 5074568 1973160 ~ 1977968 (-)
AMCG00021153 NA other upstream 52164 7115420 ~ 7122491 (-)
AMCG00021249 NA other upstream 5030221 12093477 ~ 12100854 (-)
G84814 NA other upstream 5463837 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 5656608 12719864 ~ 12801586 (-)
G84952 NA other upstream 6564079 13627335 ~ 13627747 (-)

Expression


Co-expression Network