AMCG00021155


Basic Information

Item Value
gene id AMCG00021155
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 7088001 ~ 7101704 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021155
tctctctctctctctctctttgtgacCCACTCTCCCAGTAATTGGACCTCAAGGTTTACTTCTTGCATAACCTTTGCTGAGCTCTTAAATACCTTTCCTGACTGGGAAAGTCCTGAGTGATTGCAAAGTTGCCGACTTGTGGGGAAACAATGAAGATGGAGTTGTTGTCTTTTGTTGTGCTTTGCTGTGTTGTTGAGGAGTCCTGGGCCATTACTAGAGAATATAACATTGCTGCAGTGGAGCTGGAGTGGGATTACCTGCACAGTGATCGACTGGATTCCCCCCCTCCACAGAGCAGgCACCAGAAATCACTCAGTCCTTCCAAGGATGGGCCACAGAAGTACATGAAGGCTACATATTGGGAATATACAGATTCCACATTCTCAACACCAATATCCAAGCCACCGTGGATGGGAATTCAAGGGCCAACCATAAAAGCTGAAATCAATGATGTAATAGTGGTTCACTTCAAGAATTTTGCATCACGCCCTTTCAGTGTGCACCCTATTGGAATCTCCTACTGGAAACAATCAGAAGGAGCCGGTTATAGTGACGAGACGTGTAAGCAGGAGAAAGGGGACGATTCTGTGTCTCCAGGGGCGTATTATCGCTATGTCTGGGAGATCATGCCTTCAAATGGACCAACCCTTGGGGATCCAGATTGTCTCATTTATTCCTATTCCTCCCAAGTCGACACTGTAAGGGACTTCAACTCTGGTCTAATTGGGGCTTTGTTTATATGCAAAGCAGgtCTGAAATTATGCCTGCAAAAGCCAGCCGTTTGGCATTTAATTGGAATGGGCACCAGCCCCCAGATTCACTCCATTCATTTCCAGGATCACACCTTGCAAGTGGAGAAACACAGGAAAATGGCCTTGGATATGACGCCCATGACTTTCACCACAGCAGAAATGAAACCAGTGGCCATTGGGAAATTTCTCATATCCTGCCAGATACACTCTCACCTGCAAGCTGGCATGAATGCGTACTTCACTGTGGAGAGCTGTCCCGAGGagctgaagaagagaaaagtcACCCAGGACCCCGATTACAGTGACGACTACACTCTGGAGGACATGCTGTCTAATGTGGTTGTGATGAATCCTGAGCTGAACGTACGATCTGCGAAACCCAAGCCCAGGAGATGGGTGCATTACATTGCAGCTCAGGAGGTCATGTGGGATTACATCCCAAATTTCCCCGGTGAAAGAGAGAGGGTTTTGTCCACTGAGTTTTTAGAGAAAGGTCCTCTGCGGATAGGAAAGCAGTACAAAAAAGCTATTTACAAGGAGTATGAGGACAAGACTTTTACTAAACAAAAGCCCACACAAGACAAAGGACTTGTAGGACCTGTCTTAAGAGGAGAAGTCGAAGATGAATTTGAGATTGTATTCAAGAATCTGGCAAGTCGCCCTTTCAACATCTACCCTAATGGCCTCAGCCGTGTTCAATCACTTGTAGGCAAAGTGTTGCTGAAGGGGAAGGATTTGAAGAGCTATGCTGTACAGCCCAATGAAACCTTCACCTACTTATGGACCATTACTGCAGAGGACGGTCCAACCAAAGCAGACCCTCGATGTTTAACCCGGCTCTACAAAAGCACCATCGACCCTGTCAGGGACATTGCTTCAGGGCTCATGGGCCCACTTGTCATATGCTACAGAAAAACCCTTGACAAGCGTGGCAATGTGGTCACATCTGATCGAGAGAGGCACttgatgttttccatttttgatGAAAACAAGAGTTGGTACATCAATGAAAACAtccagaaatatattaaagcgCCCTCCAGTATTGATCCCACAGATGCTGACTTCTACAAATCTAACCTGATGTACActgtGAATGGATACATGTACAACAACCTTCGCTTCAAAGATTGTTTAGGAAATGTGGCTTTCTGGCATGTTGTGAACGTTGGAACCCAGAGTGACTTTCTTTCAGTTTACTTCACTGGAAACACTTTTGAAAGAGATAAGGtttatgaaactgttttaaCTCTTTTCCCCATGGCTGGGGAAACTGTCAGCATGGAACTGGAGACATTAGGTGAATGGGAAATTGGCTCTCTAGACTCCAATTATAAAAATCGAGGTATGAGTGCAAAATACTCAGTCCATAAATGTGAGAGTGACGATTCTGCCACGGATGGGGACATTTTTTATGAAGACTATAACTATGACAATATTTTTGCCCCTAGAGGGACTGGGAAAAACAACAGGACAATGGCCATTAGggtctgcaaaaaaaaagtgattgatAATTCATTGTCCGCGAGGGATAACGCAACAGCAAGCAGTAAACCAGACTGTTATATTGTGACTGttagagacagacagggagagagaactGAAGCGTTTTCCCCTGGAGATATTCCCCTGGATATCCTCCAAGAAATAGAAGACTCCAATACAACCATGGGAGAAAGTCAAGAGAAGCATTCAACTAAACGCAAAGAGAGGTCTCTTGCAGCAGATGAAGACCTCACCTTGTTGTTAACACCTGCCCCCTTTCAAATCCCTGAGACAGACACAAGAGATGGTGGAAGCCCACTTCTGGAAGATGATGAATCTGAGGAGGAACAAAAGGAGCTACTAGCCAATCCTGTGATTTTGATCAATGACACTAATGTAACATTGTCATCTCTTAGGAAAGCACAAGGTACCACACATTCAGCACAACAGGTCATTTTAAAGCTAGTGGACAgagtgagaaaaataaagagagatgAAGGTTCACTTCAGCAGTCAGAAGGAAAGAATAATGAGTCTCTTAATCCGGACACCAGTCAAAATACAGTGTTAGCCACAGAAGTgagtaaaaacacaaaccagaaaGGAAAGGTTGTAAAAGCAGCTCTGGATCCTAAGCTGTATGAGtggttaaacaaaaatatgctGCTGAAACGAGAAACCAGAGGGGAGAGTAAACCTGAGGACAAGAAACCTCCTGACCAGCAACACGACAAGAATGTGTTGAAATTTGACTACTCCCTCTCACAGGAAAATGTCAGCCAGGCAGGTAAGATGCAAGAAAACCCAGATGGCATTGTTCCCAATTTCCAGGATACTGGAAACATATCAGAGGGGCTGAATGCTAATGTCAACCTGTCAGAAAGTGCAAATGTCTCCAGCGGAGAACCCATGTTAGACTACGACGACTATAACCAAGAGGAGATCAATGGAACGAGTCATGATGTGTACAACAACGAAGGATTAGGTCTTCGCTCTTTGAGTGGAAAACCCCGCAATTTCTACATTGCTGCCATTGAGATGTTGTGGGATTATGGTGTCAAGAAACCACAACAACTCATTAAACCCAGAGAGATGAGAAGAGGATATCAAAAGTTTTTCACATTGTACAAAAAAGTGGTGTTCAGGGAGTATCTGGACAGCAGCTTCACCCAGCAGGTTGTGCGTGGAGAAATGGAGGAACACCTTGGGATTCTTGGACCTGTGATCAGAGCTGAGGTCAATGATGTCATAACTGTCACATTTAAGAATCTTGCTACCAGACCCTATGCGTTTCACTTCCATGGTGTGTATGACAGAACGGCGCAGGGCCAGTCCAACACACTTGGGGAAGAATATGAAAAGGCTGTAAAGCCCAATGAGGTTCGCACGTACAGCTGGAAAGTCACCAAGAGACAGGGCCCTTCCGACAGTGAGTTTGACTGCAAGGCCTGGGCTTATTACTCCAACTTCAACAAGGAGAAGGATATCCACTCAGGGCTGATTGGTCCCCTTTTAATCTGTAGACCCCAAACCCTCAACAGCCAATTTGAACAGCAGCTGAGCATCCCTGTGTTCTCGCTCCTCTTCATGGTGTTTGATGAAACCAAGAGCTGGTACATGGACgataacattaaaatgttctgtacGCCACCCTGCCAGATCAGAAGAAATGACCCAATTTTTGTAAAAGGCAATACGTTTTCTGCGATTAATGGGTATGTGGCGGAGACTCTGCCAGGCCTGGTGGTGGAACAGCACCATCCTGTCCGCTGGCATCTCCTTAACATGGGCAGCGATGGTGAAATTCATGCCGTCCATTTCCATGGCAATCCCTTTACTGTGCGAAGGGACCAGGAGCGCAGGATGAGCATCTACAACTTATACCCAGGTGTCTTTGGAATGGTTGAAATGAGGCCATCAATGGCTGGGACCTGGTTGATTGAGTGCATGATTGGTGATTATCAGCTGTCAGGAATGAGGGCAAAGATGCTGGTCTATAATCCAAAATGTGCTGAACCTCTGGGGATGAAATCGAAAAGGATTGCAGACTCCCAGATCACAGAGTCTGATCATTACGatgggTGGGAGTCTAAGCTAGCAAGACTGGACTTGTCTGGCTCAGTGAATGCCTGGACTGGAGTGAACAAAATGTCATGGATTCAGGTGGACCTGCTGGAACCCATGTTGATTCATCGAATTCTTACCCAGGGTGTGAAGCATTCTTTCTCCGAgagttttatttctcatttcatCATATCATACAGCTTGGACTCTGACATATGGAAGTTATACAAGGGAAATGGCACAAAGTCTAAGCGGATATTTGGGGGAAATGTGGATGGCTCTCAAGTAAAGGTGAACTATTTCTCTCCTCCAATAATCGCACGTTACATCAAACTCCACCCAGTGTCTTCCGTGATTAAACCCACGCTTCGAATGGAACTCATTGGCTGTGACTTAAACAGTTGCTCAATGCCCATGGGGATGGAGAATGGCCGGATTCCCAAAGATCGCATCAGCGCTTCCTCATTTTCAGGTTCCTGGCTTTCATCTTGGTACCCTTGGCTGGCCCGTCTAAACTCAGATGCCAGAATCAACGCCTGGAGACCTAAGGTCAATAACCCACATGAGTGGCTGCAGGTGGACTTTCAGTCAGTGAAAAGAATTACTGGAATCATAACCCAGGGAGCCAAAGAGATTTTCAAATACATGATGGTGACCGAATTCATCATTTCAGTCAGCTCTGATGGCGAAAACTGGTTTGCTGTTCAGGATGAGACGAGCTCCAGACAAAAGGTGCATTTCTGCGGTCTGTGA

Function

GO: NA

KEGG:

id description
K03899 F8; coagulation factor VIII

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021155 True 5054 mRNA 0.45 23 7088001 7101704

Neighbor

gene id symbol gene type direction distance location
AMCG00021152 tmem164,LOC102783906 coding downstream 8362 7079178 ~ 7079639 (-)
AMCG00021154 LOC106563513 coding downstream 24745 7052536 ~ 7063256 (-)
AMCG00021145 pak3,LOC106563430 coding downstream 243479 6815935 ~ 6844522 (-)
AMCG00021141 tmm47,LOC105912477,LOC105030438,LOC106603112,LOC107662487,LOC103353305,LOC101483903 coding downstream 417789 6659537 ~ 6670212 (-)
AMCG00021135 NA coding downstream 545699 6538542 ~ 6542302 (-)
AMCG00021156 LOC102292396,LOC102784372 coding upstream 103717 7205421 ~ 7222849 (-)
AMCG00021157 NA coding upstream 121762 7223466 ~ 7325452 (-)
AMCG00021161 NA coding upstream 338328 7440032 ~ 7441027 (-)
AMCG00021162 dkc1,LOC102780436 coding upstream 368053 7469757 ~ 7479786 (-)
AMCG00021166 tmlhe,LOC106563395,LOC107715863,LOC107562156 coding upstream 380869 7482573 ~ 7491914 (-)
G83931 NA non-coding downstream 274567 6812232 ~ 6813434 (-)
G83901 NA non-coding downstream 444478 6643222 ~ 6643523 (-)
G83862 NA non-coding downstream 451094 6569179 ~ 6636907 (-)
G83878 NA non-coding downstream 507582 6578854 ~ 6580419 (-)
G83860 pgrmc1 non-coding downstream 556728 6530936 ~ 6531273 (-)
G84052 gabrb4,LOC108429394,LOC103032374,LOC107727281,LOC107571379 non-coding upstream 288918 7390622 ~ 7390915 (-)
G84053 NA non-coding upstream 289360 7391064 ~ 7392433 (-)
G84081 NA non-coding upstream 361024 7462728 ~ 7469428 (-)
G84089 LOC107575789 non-coding upstream 409857 7511561 ~ 7511989 (-)
G84093 NA non-coding upstream 451916 7553620 ~ 7644000 (-)
G83864 NA other downstream 541424 6544492 ~ 6546577 (-)
G83761 NA other downstream 2336766 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 4369082 2677585 ~ 2718919 (-)
G83428 NA other downstream 4628622 2457001 ~ 2459379 (-)
G83313 NA other downstream 5110033 1973160 ~ 1977968 (-)
AMCG00021153 NA other upstream 13716 7115420 ~ 7122491 (-)
AMCG00021249 NA other upstream 4991773 12093477 ~ 12100854 (-)
G84814 NA other upstream 5425389 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 5618160 12719864 ~ 12801586 (-)
G84952 NA other upstream 6525631 13627335 ~ 13627747 (-)

Expression


Co-expression Network