AMCG00021161


Basic Information

Item Value
gene id AMCG00021161
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 7440032 ~ 7441027 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021161
ATGGCAGATGCCGGCTTGAATTCCAGTGGTGTCCACAACAACGTTTCCTGTGAGATACAAGATGGCAGCCTGTCCCTGGTGTTACCAACATGCTACTCTGTCATCTTTATCATTGGACTGCTCAGCAACATAGTGGCCctcagtgtgtttttcttcaagaAACGGACAAAGACCTGCATTTCTGTCTACATGAAGCACTTGGCCATAGCGGACTTCTTTCTTGTCCTCTGTTTGCCCGTTCGGATCTACTACCATAACAGTCCCGGGCCCTATTTTCTGTGCAAGACAGTCGGCATTTTCTTCTACATCAATATGTATGCCAGTATCCTGTTCCTGACCTTGATTAGCCTGGATCGGTATTTGAAGATAATCAAGCCTGTGTGGGTCTTCAAGATCCAGAAAGTGAAATGGGGCCAAAGGATGACTTGTGCTGTTTGGGTTGTCCTCTTCTCTGGTATGTTCCCTTTCTTCTTAGAGAACAATGAATCCCATCCTTGCAGTGGGACGTGCTTCCATTTCCACAGAAAGGGCCTGGTAGGGGGTATCATCAACCTCATCGTCGTGGGATTATTTTTCCTCCTGGCTTTCCTCTTCCTTGGTTTTTATGGGAAGATTGCCATTAAGCTTAAAAGCATGTCTCTTGGGAACGCTCCACAGAAAACCAAGCAAAGGAAGAACATAGCTATCATAAAAACCTTTGTTGTGCCCATCATCTTTACCCTGTGCTTCATGCCGTACCACGTTCTTAGAGTACCGTATGTGCTTTCCCAGATGGACATCATAAAGGGTCTAAGCGCCCGTCAGACACTGCATGTCCTCAATGAACTGGTCCTCTGCCTCTCGGCTCTCAACAGTTGCTTGGATCCCATTATCTACTTCTTCCTCTCATACACGTTTAGGAAAACTATACTCTGTGCTTTCCAAGGCCAGTTCAAGAAGGTCTACGCAGTGAACCTAAGAGGGACAAGTTTTGTGAGGTCTGTCACTGAAATCTAG

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021161 True 996 mRNA 0.46 1 7440032 7441027

Neighbor

gene id symbol gene type direction distance location
AMCG00021157 NA coding downstream 114580 7223466 ~ 7325452 (-)
AMCG00021156 LOC102292396,LOC102784372 coding downstream 217183 7205421 ~ 7222849 (-)
AMCG00021155 NA coding downstream 338328 7088001 ~ 7101704 (-)
AMCG00021152 tmem164,LOC102783906 coding downstream 360393 7079178 ~ 7079639 (-)
AMCG00021154 LOC106563513 coding downstream 376776 7052536 ~ 7063256 (-)
AMCG00021162 dkc1,LOC102780436 coding upstream 28730 7469757 ~ 7479786 (-)
AMCG00021166 tmlhe,LOC106563395,LOC107715863,LOC107562156 coding upstream 41546 7482573 ~ 7491914 (-)
AMCG00021169 LOC107669001,LOC107691958,LOC107562838,LOC107742332,LOC107588216 coding upstream 374101 7815128 ~ 7816111 (-)
AMCG00021173 NA coding upstream 465131 7906158 ~ 7914299 (-)
AMCG00021175 clcn5a,LOC107715429,LOC106563682,LOC107557080,LOC107733513,LOC107673797 coding upstream 512045 7953072 ~ 7976121 (-)
G84053 NA non-coding downstream 47599 7391064 ~ 7392433 (-)
G84052 gabrb4,LOC108429394,LOC103032374,LOC107727281,LOC107571379 non-coding downstream 49117 7390622 ~ 7390915 (-)
G83931 NA non-coding downstream 626598 6812232 ~ 6813434 (-)
G83901 NA non-coding downstream 796509 6643222 ~ 6643523 (-)
G83862 NA non-coding downstream 803125 6569179 ~ 6636907 (-)
G84081 NA non-coding upstream 21701 7462728 ~ 7469428 (-)
G84089 LOC107575789 non-coding upstream 70534 7511561 ~ 7511989 (-)
G84093 NA non-coding upstream 112593 7553620 ~ 7644000 (-)
G84108 NA non-coding upstream 360102 7801129 ~ 7805537 (-)
G84132 NA non-coding upstream 482994 7924021 ~ 7931516 (-)
AMCG00021153 NA other downstream 317541 7115420 ~ 7122491 (-)
G83864 NA other downstream 893455 6544492 ~ 6546577 (-)
G83761 NA other downstream 2688797 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 4721113 2677585 ~ 2718919 (-)
G83428 NA other downstream 4980653 2457001 ~ 2459379 (-)
AMCG00021249 NA other upstream 4652450 12093477 ~ 12100854 (-)
G84814 NA other upstream 5086066 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 5278837 12719864 ~ 12801586 (-)
G84952 NA other upstream 6186308 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 6428912 13869939 ~ 13917868 (-)

Expression


Co-expression Network