AMCG00021193


Basic Information

Item Value
gene id AMCG00021193
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 8379989 ~ 8515922 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021193
ATGTGGAAGACCATTTGGCAGGCTGTTGAGTTTATTGACAAAGAGAAAGGATTAGaCACTTACTTGTTATTCCTCGGGGACCCGGAGGCCCTGGGGCCCCAGGAAAACCGGGCCTTCCTGGGGTGCCTGGAAATCCATAAACAGTACTGCCAGGATTTCCTGTCTCTCCCTTCGGTCCTGGTGTTCCAGGAAAACCTGGACGTCCTGGTATACCTgagcaagaagaaaaaaagaggatctgaaaagagagaaagcatCTCATCTCCCACAGTGAGAAGGCTGGAGGGCCTGGAAGGCCTGGTTGTCCAGGGGGGCCCACTGGCCCTTCTTCACCTTGGAAGCCTGGGGTGCCATCTTGCCCGGGATCTCCAGGTGGACCTGATAGCCCATAAACTCCACTATGCCATTGATCAGCGGGCGGCCTGGGTCACCGGGTGGGCCCACATCTCCCTGGATATAGTAACCAAGGAGAGACAGGGTACGCTGAAGGCCCTGGGGATGGCGGCAGAGGGGAAGAAAGGAGAGCAGCAGGGCAGCAGGCAGAGGTACTGTCTCAGTACAGCCAAGGCCACACCTTTGACCACTAATAACCTTCTCATGCTGCAAGTCTTGCGCACGATCCCCAGGGCTGGGACCACTGCTCCGATCTGTGTTACCTTATCTCCTTTGAAGATAGTGCTTATCCCTGGCCCGCCTACTTGGATGACCCTTCAAGTCCCACGTTACCCCTCTCCCCCCTGGGTCCCTGTGGCCCCTGGCTACCCACAAATCCTGCAGGTCCATCGGGCCCTACAAGCCCCAGAGGTCCTGGTCGACCCTTTGGCACGGCTCATTGAGcagggacaaaaaaaaagtccctgGGCTGACTCGACATCTTCATTCGGCAAGCAGAGGAAGGAGGGGGGAGGCAGCCTAGACAGAAGCCTGGCCCACTGGGGGCATCGGGGTCTGGCAGGGCGGAAACTGATGAGGAACACACAGAAAGGGTTGCCAATACAAACAGTGGTCATGGCATGCCAAGAAAGGTTATCACTGGAGCCTGAatatggggaggtcagcagtgTACCAGACTTTACCAAACCAGACTCTGAGCAGCTGGAATGTGCAGCCATATTGGACACGTTACTCAATGGAACCATGCACTTCCTAAACGTAAgTTGGCAGCATGAAAAGGAATGGAAGGAGGTGGGCATTGAaagacaatacaattttaacctTTTCATAATGCCCTCTGAACTCCATTATGACCTCTCCATGACCACACTAGGGGTCCAACTCACAACCCACTACTTTgaaaaagATAGGAAACTTAAGACTTACAAACTTCAGCTGTGGTTCAAAAGCCTCCTCCGTGCCCGACCCGAATCCATGCAGACTGCGGCCAGCGCTGGAAGCACTGGAGGAAGGGGCGGGGCGTCGGCTGTCAATCAGAGGACATCTCAAAAAAGAGACGTTTCCCCTAAACTGCGCTGCTCCTTCGTTATCATGGATCACGGAAGTGAAGAATATGACAAGGCCCACTTCCACACTCAGTTGTCTATTGTTGAGCAGCGGTTTGCGGAgaaaatgaagatgaagaagTGTCAGAGTTTGCCCAACGTTGCAGTGAGTCTTCTGCTGGTAGTCCTGTGCCTCGGGGTTGACAAATCGCAGTCGGCGGATACCAAAGACAACCCTGAACATTTAAAAGACATAGccagtgtgtgttcagtggtCTCGCTGGTACATTCTAGTCCCACTCATCCACACCGCAAGCAGCTGGAACATGTCAGAAAAGGTTCAGACCCTCCAGATGTGAGCACGGTACGCCACCAGAGACCGGCGACTCCTCGCCAGCTGGTTCAGCTTCAACTCGTTCAGCATATCCTGAAACTCTTGAGCTTCAGATTTGCAGTGCTGGAACTTGACTCGGTAGGTGAAGGTGACGAGAGTCTGGAGAAGATAGCGAAGTTACAGGCTGGTTTTACCCAAGCCTTCCAGCCCATTAACTTCCATGATGTACACAGAGTCCACCTCCAGTTTGACTGTATCCAGCCTTTCAGAGAGCAGATCGGAAATGAGTTTAAAGCTGATGGGATTTCAGTCTGTGCTAGAGAACACAGTGCAGAGTTTTCTGAGAGGAGGCCAGAGTGTCTCCGCAATGTGGCAGCTAAGGTTACAGCATGCCATGGGTGCGCATCGGGATCAAAGTGTGACTGCAGTGGAGTGAAAGGAGAGAAGGTTTACAAGGCCAGCCTGGATTACCAGGTTTTGCTGGACCAGAGGGACCTATCGGACCCAGAGGCGAAAAGGGTGATCCGGGACCTCCGGGACCATTTGGACCCAAAGGAATTCGAGGACCGCCAGGGCTCCCAGGATTCCCAGGCACACCTGGACTTCCAGGGTTGCCAGGACAGGATGGCCCCCCTGGTCCCAGGGGCACACCAGGCTGTAATGGGACGAAGGGTGACAGAGGATTCCCAGGAAACCCAGGTTTTCCTGGTTTACAGGGCCCTCCGGGTCCACCTGGGGGAACCTGGGGAAGTGATTTCAGGAAGTCTCTTTGGTCAAAAAGGAGAACCTGGTCTGCCTGGCCTTCCAGGGGTGAAGGGATCCATGGGCCCTGAGGGGTTTACCGGCCCTATTGGCCCACCTGGACCTCCAGGTTATACGggTCAACCAGGTCCACCTGGCCCACCAGGTCCAAAGGGTAACATGGGTTTGAATTTCCAAGGTCCTAAAGGTGAAAAGGGTGATCAAGGTCTCCAGGGGCCTCCCGGGCCACCGGGGCTGATTGGTGAGCAGAAGAGACCCATAGACTCTGAGGTCCAGAGAGGAGACAAGGGTGATCAGGGGGTGCCCGGTCCGGCTGGGTTTCCTGGTCCACCTGGGCCTCCAGGTCTTCCTGGTGGTCCAAAGGGTGAGAAGGGGGAACCAGGTGAAGCCGGCAAGAGGGGAAAACCAGGGAAAGATGGTGATCCTGGGATTCCCGGAGGCCCTGGTGACCGAGGTGACCCGGGCAGTCCTGGCTTTCCTGGCAGAGATGGGGAAAGGgGTGAAAAAGGTGACCGTGGTTTTCcaggccccccaggactgGTGTTGAATGGTCCAAATTTCAACAGAGTGGGCCCAAAAGGGGAACCAGGATTCCCTGGAAATCCAGGaaggaagggagacagagggttCCCCGATTGCAATTCCCAAGTTTATCGGGTCCTCCAGGGCAGCCCGGACTTCCAGGTGTCTCCACTCCAGGGCAGCCGGGCCAGCCTGGTTTCCCAGGAGAGAGGGGGCAGAAGGGAGCTGAAGGACAGCCTGGCGTCTCTATACCCGGGTCACCTGGGGAGGATGGGCGACCGGGACTCCAAGGACCAcctggccctccaggaccaccTGGACTCTCTTCACAAGATGGGAATTGTCTGGGCGGGACTCCAGGTTTGCCGGGACTACAGGGGGAGCGTGGATTTCCGGGAGAGGTTGGCCAGAAAGGTGACAAAGGGGAAACCTGCATCAACTGTTTCATTGGAGACCTGCTCCCAGGGCCCCAGGGGCCACCTGGGCCTCCAGGGTTCCCAGGGTTTTCCTGGTAGTCAAGGCTTGCCTGGTATACCGGGTACGAAGGGGGACCCTGGTGAAGCCATCTCTCTCGCTGGGATGAAGGGTGATAAAGGAGACACTGGCTTCCCTGGCCCCCCTGGACTCCCTGGGCTTGAGGGAAGACCTGGTCGTGATGGTATTCCTGGTGCACCAGGAGCCAAAGGAACACCTGGATCTCTGCTGGTAAAAGGAGAACGTGGCCCACCAGGGGATTCAGGGCTTCCAGGCAGTCCAGGGGACAGAGGTCCTCAAGGCCCCCCCGGATTTGGCCCCCAGGGTCCCTCAGGGGAGAAGGGGGTCCAGGGGGTCCTAAGGGAGATCCAGGACAAACTGTATCGGAAAAGGGGGCTCCGGGTGTCAGAGGATCGCCCGGTGACCCTGGACTTCCAGGATCTCCAGgTAACCCAGGGCAGCCCGGACAGCCAGGTTTTCCTGGTCTGCCAGGCACAAAGGGGGACCCTGGCCTACCGGGCATTGGCCTACCTGGACCTCCAGGAACTAAAGGGTTCCCAGGGTCTCCTGGCTCATCCGGTTTACCTGGCCCCCCAGGAAGAGCTGGTACTGATGGGTTTCCAGGCACACCAGGGACACCTGGACCCAAGAGACTCCAAAGAGCATTCTTTCATTgGAGACCCAGGATACGGTCTCCCTGGGCCCCAGGGTCCCCCAGGACTTGCCGGGCCTAAAGGATCTTCTGGACTGAAGGGGGATTCTGGATTTCCAGGGAACCCTGGACAGCCAGGACGCCCAGGTTTTGATGGTACCCCTGGATCTAAAGtaACTGGAAAAAGGCACGTGTTGCAGATAACTGGGATCCTGGTGCACCTGGTCCGCCGGGAGCCAGAGGTCTTCCAGGACCTCAAGTATTTGGAATACCGGGGCCCCCGGGTCCCACAGGACCTCCTGGTGCTGTGGGTCCCCCAGATTATCTTGCCAACACAGGATTTCCAGGTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021193 True 4536 mRNA 0.57 54 8379989 8515922

Neighbor

gene id symbol gene type direction distance location
AMCG00021192 col4a5,LOC106608922 coding downstream 7247 8361931 ~ 8372742 (-)
AMCG00021188 LOC107707922,LOC101154659,LOC108412583,LOC101071205 coding downstream 104359 8264949 ~ 8275630 (-)
AMCG00021176 shroom4,LOC107588210 coding downstream 355587 7982400 ~ 8024402 (-)
AMCG00021175 clcn5a,LOC107715429,LOC106563682,LOC107557080,LOC107733513,LOC107673797 coding downstream 403868 7953072 ~ 7976121 (-)
AMCG00021173 NA coding downstream 465690 7906158 ~ 7914299 (-)
AMCG00021191 NA coding upstream 25719 8541641 ~ 8548618 (-)
AMCG00021209 mtm1,LOC106577925 coding upstream 42310 8558232 ~ 8580015 (-)
AMCG00021208 NA coding upstream 75102 8591024 ~ 8603676 (-)
AMCG00021202 NA coding upstream 115750 8631672 ~ 8636891 (-)
AMCG00021201 NA coding upstream 245781 8761703 ~ 8763622 (-)
G84203 NA non-coding downstream 172439 8201759 ~ 8207550 (-)
G84184 NA non-coding downstream 263162 8064531 ~ 8116827 (-)
G84188 NA non-coding downstream 305291 8072093 ~ 8074698 (-)
G84156 NA non-coding downstream 400166 7978250 ~ 7979823 (-)
G84132 NA non-coding downstream 448473 7924021 ~ 7931516 (-)
G84304 NA non-coding upstream 71647 8587569 ~ 8589053 (-)
G84305 NA non-coding upstream 73298 8589220 ~ 8590488 (-)
G84307 NA non-coding upstream 185657 8701579 ~ 8701918 (-)
G84311 NA non-coding upstream 225239 8741161 ~ 8741413 (-)
G84332 hmgb3a,LOC106563671,LOC107750581,LOC107678073,LOC107561946 non-coding upstream 320353 8836275 ~ 8840659 (-)
AMCG00021153 NA other downstream 1257498 7115420 ~ 7122491 (-)
G83864 NA other downstream 1833412 6544492 ~ 6546577 (-)
G83761 NA other downstream 3628754 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 5661070 2677585 ~ 2718919 (-)
G83428 NA other downstream 5920610 2457001 ~ 2459379 (-)
AMCG00021249 NA other upstream 3577555 12093477 ~ 12100854 (-)
G84814 NA other upstream 4011171 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 4203942 12719864 ~ 12801586 (-)
G84952 NA other upstream 5111413 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 5354017 13869939 ~ 13917868 (-)

Expression


Co-expression Network