AMCG00021194


Basic Information

Item Value
gene id AMCG00021194
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 8766301 ~ 8778421 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021194
ATGCTGAAAAAAGATGGCTCTATTTATAGAAGCAGAGCAATTTACATAGATGCACTGCATACCATTGTTCCAGGCTTACAGGACGTGAGCAGCCTGAAAGCAGACATCTCTCTGGCCGACCTGGGCCTGGACTCTATCATGGAGAGCGGGAACTGTCCAGCCAGCAGGCCGGCAGCGAGGAATAAGAGCAGCAAATTCTGCCTACCCAAGGTTTTTACCGGTTTCAGGATGAAGAGAGAGAACTGCTTTGATCAGTTAACAGCGCACCTGCTCTTCCTGGTTCACCCCATCAATGGCTCCATCGCTGCCTTCCACACCCTCACCAGGAAGCTCAGCATGTCCTGCTATGTCCTGCAGGGCACCAAAGCTGCCCCCATGGGCAGTATCCAGAACCTGGCCTCCTATTACATGGAGTGTGTGTGGCAGGTGCAGCCAGAGGGGCTGTACCGCATCGGGCGCTATTCATTCAGTGCCTGCATGGCCTTTGAGATGTGCTCTCAGCTGCAGATGGCCTTGCGGCCAGTGGAGTACCTCTTCCTGTTCAATGGCTTACACTACTATGTGGCACAATACACCCAGGCTGTGTGCCTGACTATCCCTGGCTGCCCCCACTATCAACCCCCGGCCCAGCACTCGGTGTCTGCCCACTTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021194 True 654 mRNA 0.55 5 8766301 8778421

Neighbor

gene id symbol gene type direction distance location
AMCG00021189 ankrd46 coding upstream 211141 8549054 ~ 8555160 (+)
AMCG00021190 NA coding upstream 225652 8502496 ~ 8540649 (+)
AMCG00021186 NA coding upstream 431542 8331313 ~ 8334759 (+)
AMCG00021187 NA coding upstream 452876 8300022 ~ 8313425 (+)
AMCG00021185 rasl11a,LOC107596470,LOC107707904,LOC108412587,LOC107684967 coding upstream 483009 8276056 ~ 8283292 (+)
AMCG00021195 NA coding downstream 2130 8780551 ~ 8801816 (+)
AMCG00021200 hmgb3a,LOC107750581,LOC107678073,LOC106563671,LOC105024648 coding downstream 57791 8836212 ~ 8842182 (+)
AMCG00021199 NA coding downstream 73904 8852325 ~ 8855863 (+)
AMCG00021196 trpc5,LOC108431879,LOC101077030,LOC108261176,LOC106523850 coding downstream 158557 8936978 ~ 8939942 (+)
AMCG00021198 LOC107665932 coding downstream 175527 8953948 ~ 8974608 (+)
G84298 NA non-coding upstream 177338 8587598 ~ 8588963 (+)
G84276 NA non-coding upstream 207883 8555961 ~ 8558418 (+)
G84244 NA non-coding upstream 390263 8375331 ~ 8376038 (+)
G84196 NA non-coding upstream 558923 8201838 ~ 8207378 (+)
G84155 NA non-coding upstream 786475 7978217 ~ 7979826 (+)
G84477 LOC108440084,LOC106603334,LOC103024645,LOC105026974 non-coding downstream 1086265 9864686 ~ 9878867 (+)
G84495 NA non-coding downstream 1227690 10006111 ~ 10009690 (+)
G84535 NA non-coding downstream 1446662 10225083 ~ 10225298 (+)
G84536 NA non-coding downstream 1449484 10227905 ~ 10262453 (+)
G84549 NA non-coding downstream 1501567 10279988 ~ 10361508 (+)
G84301 NA other upstream 132891 8631727 ~ 8633410 (+)
AMCG00021180 NA other upstream 723002 8040170 ~ 8043299 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other upstream 1645064 7111997 ~ 7121237 (+)
AMCG00021133 NA other upstream 2219700 6544234 ~ 6546601 (+)
AMCG00021114 NA other upstream 4532504 4202711 ~ 4233797 (+)
G84425 NA other downstream 637846 9416267 ~ 9423419 (+)
AMCG00021240 LOC107742636 other downstream 1691642 10470063 ~ 10719327 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other downstream 2184727 10963148 ~ 10987174 (+)
G84749 NA other downstream 3296924 12075345 ~ 12100707 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 4656886 13435307 ~ 13437408 (+)

Expression


Co-expression Network