AMCG00021202


Basic Information

Item Value
gene id AMCG00021202
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 8631672 ~ 8636891 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021202
ATGATGCAAGTGCTGTCGTTGCAAGGATCGGTAAAGAGGAAGTTGGCGGATGATAGCTCACCTGTAGTTAACGGCGTGTCTGATGGGATGATCCCTGGTAGCAGCAAGAGACCCTGCCTGGAAGATGTGACCCTGTCTATGGGACCTGGCTCTGGGCCCAGCATGTCCCAGAATTCACCCTACTCCTCAAGCACTGGGGTGGGAGGCCACTCTGGGCTTCTGGATGGCAATCAGATGAATGGTAATGGTATGGGCTCCCCTTTCTCTGAGATCAAGCCCAGCCCTGGCACAGCAGGACATGGGGGCATGCTACCTTCTTTTGACCCCAATGGCAACAGCAACGCTCCCTCTGTGGAGCAGGAGCTGCAAGACATTCTCGATGAGCTCACGAAAAACCCTGATCCCTCTCTCAATGAGTTGGATATCGAAAAGATCTTGGGGAACAAGAGCGATGAGCAAGTGAGTGTGGGCTTCATGCATCCTGACACTAACGGCACTCCTAAACGCTCTCCTCCGAGGACCTCGCACTTGGAGAGTCACCTGACCAACAAGGACTTCTCCCCAGGCTTCAGCCAAGCTCCGGTGGGGTCACCACAAGTTGGACCTCCTTCAGCTGGGGCTCCATACTCCCTGCCACACCCTACCAAGGCTGTTCCCTCACCCATGTCCTCCAACAGCCAAAGTCAAACGCAAGCGCGGTCACCCATGCTGTCTGCTGCCCTGTCGAACCGTTCGGGCACAAACTGGCATGAGGTGTCACGGGCCCAGCAGCTGCAACAGATGGCCAACAGCAAACACATCTCCACTCCACCACAGCCGCCACCTGCCCAAGCCTCTTCCTGGCCGACAATGCCATCTTCCGGTCCATCTCCCCCATACCGTGCTGAAAAGCTTCCAAGTTCCTCACCGCACCAGCAGCCGTTTAGCCCTGCCACCAGCATCCAGAGCCCCAAGAACGCCATGATCTCCAGCATGGCTCCTGCCCCGTCCACTGGGCCTTCTCCTCCCTACAGACCCGAGAAGCTGGCAAGCCCAGCCCTGGCACAGCCTCCATTCAGCCCACAGAATTCCTTGTTGCCCAACATGGCTCCCACAGGGGGGCAGAGCACCCAAGCCAACTTAATGCCCAACATGCCCTCTTCAGGCACCAGGCCTTCCCCACCCTACAGGCCGGACAAGCTCTCCAGCCCGGCTGTTCAGCAGCACACCTACAGCCCTCAGAACGGGTCAGGGAGTGCTATGACCAGCCAGTTGTTTAAAGCCATGACCTCCAGCCAGCCCAGCCTCAACATGCTgatgcaacagcagcagcagcagcaacaacaaagcCAACCAGCTCCACAGCCCCAGCAGCAGCCgccacagcaacagcagcaaccgGCACAGCAAgcagcccccccaccacccagcGCCATGCAGCAAGGCCTAATGAATAAGGGCGGCTTGGGCCAGGACCCTTTCTCCTTCAACAACACCAAGCCACTCAGCCACTTCGACCCCGACCCGCCCCCAGCTCAGAAGGTGGCATCCATTCCTGGTGGGCCAGGACAGCCTTCTCTGACTCACTACATGCCACCGCAGTCGAGCTCGGGAATGCCACAGCCTCCCTCGGCCAGCCACTCTCAACTGatccaacagcagcagcaacagctaCAGCAACGCATGCCAAGGGCCCTGCAGCCAGGAGGCCTGATGCCACTCAACAGGGCGGTGAGTACTTTGGGTTCCACCCCACTGGTTTACTGGAGTACTTACTGTACATAA

Function

GO: NA

KEGG:

id description
K19512 MAMLD1; mastermind-like domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021202 True 1764 mRNA 0.58 2 8631672 8636891

Neighbor

gene id symbol gene type direction distance location
AMCG00021208 NA coding downstream 27996 8591024 ~ 8603676 (-)
AMCG00021209 mtm1,LOC106577925 coding downstream 51657 8558232 ~ 8580015 (-)
AMCG00021191 NA coding downstream 83054 8541641 ~ 8548618 (-)
AMCG00021193 NA coding downstream 115750 8379989 ~ 8515922 (-)
AMCG00021192 col4a5,LOC106608922 coding downstream 258930 8361931 ~ 8372742 (-)
AMCG00021201 NA coding upstream 124812 8761703 ~ 8763622 (-)
AMCG00021204 tmem185a,t185l,LOC106563673,LOC108429425 coding upstream 132442 8769333 ~ 8774394 (-)
AMCG00021203 NA coding upstream 165371 8802262 ~ 8818843 (-)
AMCG00021205 NA coding upstream 345605 8982496 ~ 8999604 (-)
AMCG00021206 dach2,LOC107581921 coding upstream 431127 9068018 ~ 9074386 (-)
G84305 NA non-coding downstream 41184 8589220 ~ 8590488 (-)
G84304 NA non-coding downstream 42619 8587569 ~ 8589053 (-)
G84203 NA non-coding downstream 424122 8201759 ~ 8207550 (-)
G84184 NA non-coding downstream 514845 8064531 ~ 8116827 (-)
G84307 NA non-coding upstream 64688 8701579 ~ 8701918 (-)
G84311 NA non-coding upstream 104270 8741161 ~ 8741413 (-)
G84332 hmgb3a,LOC106563671,LOC107750581,LOC107678073,LOC107561946 non-coding upstream 199384 8836275 ~ 8840659 (-)
G84514 NA non-coding upstream 1450813 10087704 ~ 10090475 (-)
G84603 NA non-coding upstream 1776284 10413175 ~ 10414481 (-)
AMCG00021153 NA other downstream 1509181 7115420 ~ 7122491 (-)
G83864 NA other downstream 2085095 6544492 ~ 6546577 (-)
G83761 NA other downstream 3880437 4703255 ~ 4751235 (-)
AMCG00021090 NA other downstream 5912753 2677585 ~ 2718919 (-)
G83428 NA other downstream 6172293 2457001 ~ 2459379 (-)
AMCG00021249 NA other upstream 3456586 12093477 ~ 12100854 (-)
G84814 NA other upstream 3890202 12527093 ~ 12527694 (-)
AMCG00021259 diaph2 other upstream 4082973 12719864 ~ 12801586 (-)
G84952 NA other upstream 4990444 13627335 ~ 13627747 (-)
G85037 LOC100846954 other upstream 5233048 13869939 ~ 13917868 (-)

Expression


Co-expression Network